Report for 1892.m00142

 > 1892.m00142, length: 506, copies: 1 

MASAVLVFAGRSVATPAISFFVNKAFSYLNKYHKSEGLGDMKKRLKMNIPKIQSVIDVADPDYIKERSEDLDTWL

WQLRDAVEKAEDAIDELEYYELKEKQKDLKDSHLGSSFAKMNHKFFQSVKHVKMLGKTSDSPLKRLKKAMEDLDE

AAKGVENFLTVVDQITRPNLNIPQRHHSISRYRETGRMLTADRVFGRENEKERIVGWLTSTSSEENEVVMNNNPV

PIMSIVGHGGIGKTTLAQLIAKENRIKEHFKTVIWVSVSTNFNAETLISKIIQSVTLSKPSFDTYDALQEHLART

LETIKYLLILDDVWEDKEISEWEKLFASLRTGVYGRKILLTTRMQSVADLASAIPKNLKNYKKLEKKLQETKRVS

LGNKGMEDIMKVLKVCFRYCSIFPQDHEFKKEELVQMWIASGLISQTTGECARIFDANGSKKVKRTVRHLSVVGI

NSFPADIIKSFSRFKNLRTIVFEDCHDIQDNTVCSVEEVVRRDLKSPACRESSLIQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	178	349	1.5e-36
NB-ARC [Pfam ls]	178	424	3.4e-25
NB-ARC [Pfam fs]	388	424	8.9e-12

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	29	419	5e-30
RPM1 [A. thaliana]	179	354	1e-13
Xa1 [Oryza sativa]	185	348	3e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	77	98

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1892.m00142

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)