Report for 1945.m00125

 > 1945.m00125, length: 494, copies: 2 

MAEGVVGSLIVKLGNTLASEAVELAKSLLGLEGSALKRLFSEIRDVKGELESIRAFLQAAERFKDADETTSAFVK

QIRRLAFGIEDAVDEFTYQLGEGGGRMPFKRMCKIGTWSRLAANLQDIKVSLKSAAERRIRYDLKGVVVRGVKSV

VGSSSNSNWRSDSVHFKRDDDLVGVDKNRDLLMRWVQDEQQQRHRIVSVWGMGGIGKTALVANVYNAVKDDFDTC

AWITVSQSYDADDLLRTTVQEFRKNDRKKDFPDDEGASSYRRLVETIRSYLENKRYVLVLDDVWSTNVWFDSKDA

FGGANIIGRIILTSRNYDVALLAPETNIINLQPLVKSHAWDLFCKEAFWKNGNRDCPPELLQLAQNFVDKCHGLP

IAILQLYDAYDGKNIYFHENSFPRLRELSIRGAPHLNEIEMKRGAVASLTDLKLLVCPNLKQLPYGIEHVRTLEE

LTLDRAAEELVGRVRQKTETVISHVHRVYVGFSRNGVLAAERIQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	157	441	4.3e-17
NB-ARC [Pfam fs]	196	378	1.1e-37

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	4	387	3e-26
RPM1 [A. thaliana]	27	381	1e-35
I2 [L. esculentum]	43	381	7e-22
Pib [Oryza sativa].	53	322	3e-12
Pi-ta [Oryza sativa]	67	378	3e-21
Pib [Oryza sativa].	163	379	2e-19
L6 [L. usitatissimum]	170	401	6e-11
M [L. usitatissimum]	170	378	4e-11
RPS2 [A. thaliana]	172	381	9e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1945.m00125

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)