Report for 1946.m00191

 > 1946.m00191, length: 1468, copies: 1 

MESVAVNAARWVVGKALSPLSGGLVEAWAASTELGPNIGAIKTELLYAQGMLHNARGRETSNPALQQLLLELRGL

AYNAEDVLDELDYFRIQDELDGTYEAAEEHAKGCLQGLVLNTRHTVRNIKKKACSCGDNGEESRHANDEEALAGS

GCIHKLFSNARERSRFLCCAYPCKALHIEHTTKTPKLKFDRVDLSTRMKHIVEQLKPVCAKVATILNLELLESNR

SIGQCIAMSLNSEFSGKMGHAVVLPSSIAMNRPVTTSDFIEPKFYGREGEKSTIINDVIEGDYCDVDLTVIPIVG

PGGIGKTTLTQQIYKEVQNHFDVNIWVCVSLNFNVYRLKEEIAKSIPKVNEENSGWPDDLIEQRLKSKRFLLVLD

DIWNLVYEDEWKQLLAPLKKAQSKGNIIVVTTRFPAVAEMVKTTNCSIQLEGLEPKMFWELFKAYAFGDEKTVND

HGNLQETGKMIAKKLKGSPLAAKTVGRLLRKHLDIDHWTGILDSKEWELQTGKNDIMPALKLSYDYLPFHLQQCF

TYCALFPEDYIFDSEQLIHLWIGLDILHSHDQNTRTEDIGLNYLNDLVSYGFFKKDEQNDGSPYYVMPDLLHELA

LKVSSYECLAISSSNVRSIQVPPSIRHLSIVIDDVDVNDRVTFENIKKDFSTLHKQLDIEKLHSVMLFGQYHGSF

VIPLGNLLSKAKALRVVLLYAPSYVVENMLHNFSNLIHLRYLRINKGYFPEMSLPNTISRFYHLRILDLQQCRGH

FGLPRDMNNLVRLRHFLVPYDNLHSDITSVGKLKCLQELRRFEVKRQVEAFALRQLGQLEDLKGSLGIYNLENVK

AAKEAELLNKSRLHKLILDWDIKRSTNDPSQEEHILENLKPHSNLLELHINGHGGATCPSWLGVNLSMKGLKSLR

LNCVDWNNFPPIGELSLVNEHGHKSLDCTTDRSFPNLKRLELVAIPRLSKWAGNDACHVFSLLEVLIVRDCPELM

ELPFSHPTTCSRPEQGTNLTQFPTLKKLEIVNCQKLSSLPPIPWTSCPCHAYIEEVGSDFQQLDYSTNNQSELCL

LVKGKDDNLDSAFWRLLVFSNLTELKELTLTKCPPLPLEHLQSLSSLRMLCMQDLSNVLLQDKAENTVRYQFPVE

KLRIFNCSCSGKELTLLSSHFPKLSMFVIRGCENIRGLGVAKQGMTAMSASSLPSAGSKLEDECLGQEQQEPGEE

DEKAAADGGLLLLPQQLQYLTIGEMSELALVFDTAGGLRGVGEGLQGLHSIKNLNIWNCPNFLSSYSSSSHHSPF

PSSLQELFLSYMSGMNTLSPLSNLNSLAKLAIWDFGDLRADGLSSLIAHGQLKELDVRRSPNFFVGSDLSLLLQL

KTDDITWLLVAPVCNILASSLTELTIGWNDEVEHFTKGQNAALLLLSSLQDLRFWCYSKLRFLPTGLHRLTRLKR

LEIALCPAIRLLPKGGLPRSLKVLDVSESKNEELKRQCRFILD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	252	557	8.2e-73
NB-ARC [Pfam ls]	252	557	2.3e-73

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	251	1376	1e-100
Xa1 [Oryza sativa]	260	1449	1e-123
RPM1 [A. thaliana]	264	978	6e-33
Pi-ta [Oryza sativa]	265	743	1e-18
Pib [Oryza sativa].	266	765	1e-30
Mla1 [Hordeum vulgare].	270	819	8e-26
RPS2 [A. thaliana]	277	984	2e-30
M [L. usitatissimum]	293	557	3e-11
N [N. glutinosa]	295	545	2e-11
Xa1 [Oryza sativa]	1027	1464	6e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1946.m00191

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)