Report for 1972.m00180

 > 1972.m00180, length: 762, copies: 2 

MTKHHPMLLFLGLALLALQPLIAAASRRPPPSPLCPKKCGNVDIEYPFGIGPNCSLSDDFSLECVHDTPQLRLGT

DRQQVVVAVLDINLLHGKIRIANSISWQCKDENDPTGAPLKNSSWMGLDVTELPYRFSYEDNQFVTVGCNVLVLL

SGEEASVDPILNVCMSTCFGNGSNIRNGYCSGAGCCEMAIPVGLKSYRLEFSGPLLFNNSWSPDNYTWCSHAVLM

EAKSFSFERDYATTDKFFRNKNGTVPVVLNFAAGSEKCKEARMKDTYACVSDHSACVGTADGYVCNCTSGYKGNP

YLPGGCTDIDVCAPGNDGCPDGMICSNFPGGHNCSCPEGEHKSNKSGVLICEPDLKRSLPDLKFKRSYRLPVSAI

IAIGVTGGIAIIVMSFLSSYLVHQRRALADIKRSYFKRHGGLLLYEELNARKSNAFTIYTEEQLEQATNGFDESN

VLGRGGHGTVYKGWVAAASDDLVVAIKRCKLMDERNKKEFGKEMLILSQVNHKNIVKLLGCCLEVDVPMLVYEYV

PNGTLYQLIHGGSAGAISFASRLRIAHESAESLAYLHSFASPPILHGDVKSSNILLDESIMAKVSDFGASILAPT

DEAQMMTMVQGTCGYLDPEYMQTCQLTEKSDVYSFGVVLLELLTGKKPLCLDGPDEGRSLSARFLAAMRENRADL

ILDEQVKSEASGELLEEITLLALECLQMCGGDRPAMKEVAERLGGLRKLHQHPWTQDVVELDEVRCLLSDSPESI

SFEVDATSSSGY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	446	648	3.6e-46
Ser/Thr pkinase [Pfam ls]	446	730	1.4e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	428	718	4e-46
FLS2 [A.thaliana]	434	722	3e-36
Rpg1 [Hordeum vulgare]	434	718	4e-24
Xa21 [O. sativa]	435	535	1e-10
Rpg1 [Hordeum vulgare]	437	728	3e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	26	in -> out
putative TM domain	7	26	in -> out
putative TM domain	375	397	out -> in
putative TM domain	375	397	out -> in

Report for 1972.m00180

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)