Report for 1976.m00182

 > 1976.m00182, length: 1163, copies: 2 

MAARYIKDELKTMHAFLRAAEVTKEKDELVKVWAEQVRDLAYDIEDCLEEFTIHVKHQSLSRQLMKLRHRHRIAV

QIRSLKLRVQEVSNRNMRYNFIKSAPSREMDDFSTNMEMTRYQAAHYVDEAKLVGFDGPKKEILKMISGSEDVEV

QTIWIVGAGGLGKTTLAKKVYESSNITSMFPCRAWITVSQSFDVMDLLKDMIKQLLGKESLDNLFTKYKEVKIKE

NNLTDHLKEWLRNKRYFLVLDDLWSTKAWDCLKPTLWGNNREGSRLVVTTRNRDLAEGSSSPLVYPLQTLHREDA

TKLLLAKTNKSLCDINKDGMNETFEKILKKCGGLPLAIITIGGLLAAKDVKEWDGLYAQIPSELENNPSFEVMRQ

VLALSYKYLPSHLKPCFLYLSIFPEDFEIQRKRLVYRWIAEGFIRARDGVSIVDVAIKYFNDLINRSLMQPSRVN

MEGTIKSCRVHDIIRDIMISISREEKFVCRIDDKETCLMEENIHHVAFYNSNSSEIAMDLNQVRSLTVFGERHKE

LTPLLCSPQVRMLRVLDFQGVRFGMTQKEMDHIWSVLHLKYMNIRCDYNLPNSSGYSKIYRIPRSIGKLQGLRVL

DISNTCITSLPTEICELRSLNILRCTRKEYYEFFDPSKPIQCLFALSCIPVTMALADSDQRHEITAELHMACSTR

WFSTCGVRVPMRIGNLKQLQELGYVDIRLTSSKAVKELGELSQLKKLRLRINGATQRKCKVLREAIEKLSSLQSL

RINAFDVSSLRNLEWLHYISSPPPFLKNLTLEGCIKEIDWLREFTHLVKIHLFGSKLKEGKTVQILGELPNLMVL

QLRWGAYVGVKLLFRAEAFPKLRKLEIRFLEDLREMRFEERTSPQMETIEISHCRLESGIIGIKHLPKLKEISLR

WNCEVARLGQLLEEVKANPNRPVLLLYNDPSKHDLGDTQEGSGTPVEANEPPKNVGESSQSNQACVEFEYNGAQP

DWFLNLTLLLMICFLRASSNTKNEVILLITACDRKYLGPYSSQGLVAQPQVQHCNWPTSLFSQSFFILWWCDNGN

DRHPNSLVYFEGKKQQCFQQYKSKSWAEVAAAAAAELKKQQAAIQVASLANWGFSHSCCVSRLGWLREKAQLNML

NMVSVDQPLCLPVAAIGKFSLVGRSSYGADDEGMLQPN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	112	424	2.5e-66
NB-ARC [Pfam ls]	112	424	8e-67
LRR [Pfam ls]	596	618	0.089
LRR [Pfam ls]	870	892	4.1

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	596	618	0.0038
LRR [sensitive, ls]	596	618	0.089
LRR [sensitive, ls]	796	826	2.1
LRR [sensitive, ls]	796	826	48
LRR [sensitive, ls]	870	892	0.18
LRR [sensitive, ls]	870	892	4.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
I2 [L. esculentum]	6	879	9e-51
RPM1 [A. thaliana]	6	899	4e-77
Mla1 [Hordeum vulgare].	9	625	5e-80
Pib [Oryza sativa].	13	281	2e-35
Pi-ta [Oryza sativa]	27	601	4e-59
Xa1 [Oryza sativa]	69	602	5e-32
Pib [Oryza sativa].	124	899	1e-109
N [N. glutinosa]	128	467	3e-14
RPS2 [A. thaliana]	128	879	2e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1976.m00182

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)