Report for 1980.m00211

 > 1980.m00211, length: 588, copies: 1 

MGEGSQNGRSWYGEKSSGMVFKGGQEGADGEPPPGTRAGDWGQHAELVGGLLRELELAELMRREATRRPLEQLQG

ALRRCYALATACQEDGGYLHRLLLGARMADELRAAQHEIDMYIRLIPLIALVDSSSNHRDKAMDGAATAIKYSSN

RHISYSAMTKSWTKLYGGPFGLTCDVLTCPLKFKTWKINLGSLVRHPNLHCQDFSLRHGTTLYLQEQKILDIEEL

VELCTRTEESCPGFSKFDFSQIVHATDNFSENSNIGRGGFATVYKLARVQHNNLVKLLGWCIHGKERILVYEFAD

RGSLQHYIFDKMRKSLLDWPQRVNIIKGVAEGLVYLHKLSMLWIVHRDLKPDNILLDYNMNPKISDFGSSSSLSS

EVAEEHTRRVVGTSGFKAPEYASRGVYSVKTDVFSFGVLVLVIISGRKNSILYKQRDAIGDLVRDVLITLSNGRE

KQRVFSVILDYSINLKNIRTKAWHMWRDGRLHELVDPSLGNVYELDQIIRCTQVALLCTQEDPTVRPTMPDVAAM

LSSGSVILLDDPKKPSELSNEVEKGGDETSTCMDQSSQTIDITITSSAPVSTRVRIIIDQEII

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	254	270	0.26
Ser/Thr pkinase [Pfam ls]	254	526	4.2e-21
Ser/Thr pkinase [Pfam fs]	271	421	2.6e-36

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	216	526	7e-19
Pto [L. esculentum]	241	522	3e-27
Rpg1 [Hordeum vulgare]	241	559	4e-28
Rpg1 [Hordeum vulgare]	251	424	9e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 1980.m00211

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)