Report for 2086.m00262

 > 2086.m00262, length: 600, copies: 1 

MADSHHCCWFLLLLLLLAAWCVRGEAEVANGGHQDLPPLLSFKSYNPAAAALESWVGGDPCSGAWIGVRCSRGRV

VGVFLDNASLVGGLAPLLGLARLGVLAVRRNSLSGRLPPLDNSTSPRLRHLLVSHNQLTGGLRVSLPSLVTLRAE

HNGFHGDLRALSVPMVRSFNVSRNMLDGEISGDLSRFPSSSFGGNLGLCGLPLPRCVHAYNALGDSVGQSPSAAM

EEASSGGSNGGLSKLSVTALMATGIGNAALMVISVAISVAMFVYMRRKLRSWKGASDAALSFEEEDKVRNREEKG

QKSNGGGLVCFDGGEELRLESLLKASAEVLGKGVSGSTYKAVLEDGIVVAVKRLSALQFPGRSKAFDRHMRLAGR

LRHRHVVSLRGYCNSNGERLLVYDYLPNGSLQSLLHGSNGGGGGGRSLDWAARKAILFGAAQGLNYIHTFPARPA

LVHANVKPSNILLDEHGAACVSECGVMRYAANIQQSIPQPPRCPPGLFLDRAAAAAGGGGWHGYAAPELASGAGA

AGARATQESDVYSFGMVLLEVVTADNAGDGNGGGGGDGGEDETMGWVKIGMLCTAEAPEERPRMAQVLAMMGEFM

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	122	145	2
Ser/Thr pkinase [Pfam fs]	328	472	5.9e-20
Ser/Thr pkinase [Pfam ls]	328	600	7.1e-14
Ser/Thr pkinase [Pfam fs]	507	548	0.00047

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	97	119	1.1
LRR [sensitive, ls]	97	119	22
LRR [sensitive, ls]	122	145	0.096
LRR [sensitive, ls]	122	145	2
LRR [sensitive, ls]	165	188	2.6
LRR [sensitive, ls]	165	188	53

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	94	593	6e-26
Rpg1 [Hordeum vulgare]	329	548	4e-14
Pto [L. esculentum]	330	552	8e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	26	in -> out
putative TM domain	79	101	out -> in
putative TM domain	248	270	in -> out

Report for 2086.m00262

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)