Report for 2100.m00096

 > 2100.m00096, length: 911, copies: 2 

MLTFVKGLDNEASAYIVDEARGRHRCVWTSSCSVDMIGTRNGLICVLDGDTGAVTVANPATRVAVHAAAAVTGVA

LAVLPRRVHVPCYFNKSGTFDAMYPLWIRPTAKLVTTFTTQAHIRHKLSRKIKAINSRLEDIIENKHKYKIEEAN

TKTTRTWKASTSISYTHKKLEYLHESDVPIHVEERKKLEKVLLTTPEDLHGKEHNPVIISVFGKSGVGKTTLVRK

IFKEIGKQKQFDIPAMECFAPYLSATNILQQIVQQLTTDNQDCPRNKVLEILEKKLKEKKYLLVIDGEVSGTELN

NILSTLPIGHAGSRIVHITESKPEEPPSNYHHVTIELKTIDKSISKKMFLHHMEVQNLDLENHEDDIIFQITGGL

PLAIALLSGLMKTKESTGEWQKVFEYLKSKQSKQIDDMLSICFDDLPHELKCCFLYLAAFPANVTIEARNLVSMW

VAEGFLRSKVGKSMEDIGYFYLKELSARNLVSLVQMDDDSNVSNMTVTIQNKVHEFLQFEAHEASFLEVHSGDDI

PTLTSARRLSLQNYTDKYAVLANPLPKLRSIFSQFEQEPKEELETMTKSIQAYVCCSPQQGTIASMQKKNIKSHI

KELLHGSEFLRVINIQGIEIGNRLTRAIGKAVHLQYLGITSCSLENIPSSIGNLTSLQTLDVRETKVRKLPKAFW

MIKTLRHVFGFILKLPKQTVNLKQLHTLDSIELEDFEQGLDNTLGEMIHLEGLVIWKISNGNVKALLSALRKLES

LKTLNLQGNNITSSVFTTLFLRRLKFMVLDGELDFSSDQLNNGLALPNLTMLTLKETKVTQEFINKLAKLPSLVT

LALCLGSYKDQELVFFSNKFRCLQKLKVDVEKLKKVEIKLSMLPKLKKLEIQTHDSHHYQEHEVTHQEHEQKTVI

SWKKENAIQVE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	165	461	2.8e-17
NB-ARC [Pfam fs]	203	291	4.4e-06
NB-ARC [Pfam fs]	372	461	1.5e-24
LRR [Pfam ls]	633	655	0.2
LRR [Pfam ls]	750	775	2.3

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	633	655	0.0096
LRR [sensitive, ls]	633	655	0.2
LRR [sensitive, ls]	656	678	0.83
LRR [sensitive, ls]	656	678	17
LRR [sensitive, ls]	750	775	0.11
LRR [sensitive, ls]	750	775	2.3
LRR [sensitive, ls]	798	821	3.4
LRR [sensitive, ls]	798	821	71

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	108	870	1e-27
RPM1 [A. thaliana]	120	877	1e-41
RPS2 [A. thaliana]	121	754	1e-23
Xa1 [Oryza sativa]	122	732	4e-21
I2 [L. esculentum]	130	863	1e-33
Pib [Oryza sativa].	208	877	4e-23
Pi-ta [Oryza sativa]	208	720	1e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2100.m00096

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)