Report for 2109.m00112

 > 2109.m00112, length: 479, copies: 2 

MSCFPCSGSSGKGGVDAKSVAALSPGPRPAASAAPDRSNSSRGSGIKKDDSVRRGGSSANDGPAKIFTFRELAVA

TKNFRKDCLLGEGGFGRVYKGQMENGQVIAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVRLIGYCADGDQRLL

VYEYMLLGSLENHLHDRPPGKKPLDWNARMKIAVGAAKGLEYLHDKANPPVIYRDFKSSNILLGEDYYPKLSDFG

LAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDHTQPAGEQNLVAWARPL

FRDRRKFCQMADPSLQGCYPKRGLYQALAVASMCLQENATSRPLIADIVTALSYLASNHYDPNAPSAKSSRTCPS

TPKAKAHRRTTSVPDAQHAADSLNWNFPDLGRKETTRGEFEQDHSEGYGSGSSSGRNDGLDVPELLALHNGQNNS

EADIYHKSSVKLDAHEKQRSGSGKGSRQF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	79	283	9.8e-50
Ser/Thr pkinase [Pfam ls]	79	355	3.2e-49

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	45	354	1e-53
Rpg1 [Hordeum vulgare]	63	349	2e-25
FLS2 [A.thaliana]	65	355	3e-29
Rpg1 [Hordeum vulgare]	67	353	6e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2109.m00112

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)