Report for 2123.m00196

 > 2123.m00196, length: 646, copies: 2 

MGDWYEQFSQSFKDAAKEMLAKTDIDPNVKCFTRKQMKRISNNYRTILGKGGFSVVYKGRLNDGRAVAVKKYNWK

TQKKEFTKEVIIQSQFSHKNIVRLLGCCVEADAPMLVTEFVPNGNLSNLLHSNSSQFPVSLGTRLQIALDVAEAL

VYMHSSQNHPILHGDVKPSNILLGDKDVAKLCDFGISRLLCMDSDEYTGFVIGSRGYVDPVFCQTGRLSLKSDVY

SFGVVLLELITKKKGIDDKKVCLAETFARISRKGNGHELFDMDVVTNENMEFLQGIGRLALECIKFEVEERPEMK

EVLERLWSLKRSRDRRIREMQVMVRSEIEVLWRRCGFGRFMISKERMDDMTYYFKTVLKECASGKAYIGRFCNAQ

LLVIKMSISVLDQWKNIVWNELNVQSRIKHWNDAKLLGYCLDLWEGLVLVYEYGAMSLYDVLFHDARKVSPFICG

LRLKIAVGAAEGLAHLHSLGIVHGNVSTVNILLDDLSVLKVISRNYPVKIAGYGTSGLPDIDKAQHTGFFMEDSL

VTSHGKEHDVYCFGLVLLTLFTWKKVSLQEADTVFEQLWDIGPPHDVNSEPEKPGQQLKEAILRCRHLEEVKSLV

SRCLTSEVTKRPSMVEVAKHLKNINDLHDSTACHELAIYQSRMLSG

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	44	308	7.6e-48
Ser/Thr pkinase [Pfam fs]	47	237	2.1e-47
Ser/Thr pkinase [Pfam fs]	284	308	0.41
Ser/Thr pkinase [Pfam fs]	378	492	0.00011
Ser/Thr pkinase [Pfam fs]	529	621	0.023

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	1	306	6e-38
FLS2 [A.thaliana]	10	310	2e-35
Rpg1 [Hordeum vulgare]	32	624	5e-32
Rpg1 [Hordeum vulgare]	32	328	3e-27
Pto [L. esculentum]	337	630	6e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2123.m00196

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)