Report for 2217.m00143

 > 2217.m00143, length: 561, copies: 1 

MELWRHVVSGDMMTKNEASFTTTLRFMIISSRTAAVGSLAFVVVPTLNAADGALPRALNTANYTITTTSNNHSLS

LDLASIMSDYNNNSNKSTSTAVNYTVWIDYDGIGHKISAYMANDGQLKPSKAIFAGHLTMSNRVPNKAYIGFFAS

GSDGETYGLLSWNITVDRVPDSGIAASKSKNKPLETGFTTVIVVFSFFSVSLIVILVFQSKKNSDAKQLLDEVLS

QLARKLKYSEIRNATGNFTDARRLGRGSFGVVYMGTLTTQRNGRTQEQRQQQVAVKKFDRDENQQRRFTDFLVEI

QVIIRLKHNNIVQLIGWCLEKRALLLVYEYKHNGSLDNHLFGNHSRQQQVLPWPTRYSIVRDVAAGLHYIHHELE

DIKSSNILLDQEFRACLGDFGLARVISGGRSSASMELAGTRGFIAPEYAQNRVATRRTDVYAFGALVLEIVTGRK

ALDHSRPSDSVLIANWVRDEFHNNGKLLEAVDGSLTTEEGLQYDADDAERLLLLGLSCTSHSASDRPSMEMVAQI

VAKPVPRPVVVVPRVEPAFVGSSSAEIDDASSLGRR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	243	453	7.4e-44
Ser/Thr pkinase [Pfam ls]	243	527	1.3e-40

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	202	522	2e-24
Pto [L. esculentum]	210	519	3e-39
Rpg1 [Hordeum vulgare]	229	522	4e-26
Rpg1 [Hordeum vulgare]	236	451	8e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	186	208	out -> in

Report for 2217.m00143

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)