Report for 2230.m00124

 > 2230.m00124, length: 430, copies: 2 

MSTAVAIISSVSATAAAVVMLALIKRCRRYRRKMKKKMLARIAHEATEQHREMEARDAADSVMIEIGPVEKFLNE

ILSEKPMRFTSEQLAACTGNYSSELGSGGFGVVYRGELPKGLQVAVKVLKVSMNKKVQEAFMAEIGTIGRTYHVH

LVRLYGFCFDADTKALVYEFLENGSLEKYLYGGGGEDRGKKLEWRTLHDIAVGTAKGIRYLHEECQQRIVHYDIK

PANILLTADFTPKVADFGLARLGERENTHMSLTGGRGTPGYAAPELWMALPATEKCDVYSFGMVLFEVLGRRRNY

DLAAQAESQEWFPKWVWDRYEQGDMECVVSAAGIGEEDRAKAEMMCKVALWCVQFQPSARPKMSSVVRMLEGEMA

IVPPVNPFHYVMSGGSGSSTLTSSSTNLSSGGTTTGSSEVAVSLPAKKSTDVMVE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	94	294	1.8e-51
Ser/Thr pkinase [Pfam ls]	94	372	7.2e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	46	371	3e-21
FLS2 [A.thaliana]	80	370	5e-33
Rpg1 [Hordeum vulgare]	80	370	5e-26
Pto [L. esculentum]	83	371	1e-37

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	24	out -> in

Report for 2230.m00124

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)