Report for 2338.m00141

 > 2338.m00141, length: 998, copies: 1 

MRLHYHHLAVVLLAAVAAAATAAAGGEADALLAVKAALDDPTGALASWTTNTTSSPCAWSGVACNARGAVVGLDV

SGRNLTGGLPGAALSGLQHLARLDLAANALSGPIPAALSRLAPFLTHLNLSNNGLNGTFPPQLSRLRALRVLDLY

NNNLTGALPLEVVSMAQLRHLHLGGNFFSGGIPPEYGRWGRLQYLAVSGNELSGKIPPELGNLTSLRELYIGYFN

SYSGGIPPELGNMTDLVRLDAANCGLSGEIPPELGNLANLDTLFLQVNGLAGGIPRELGKLASLSSLDLSNNALA

GEIPATFADLKNLTLLNLFRNKLRGDIPEFVGDLPSLEVLQLWENNFTGGIPRRLGRNGRFQLLDLSSNRLTGTL

PPDLCAGGKLETLIALGNSLFGAIPASLGKCTSLTRVRLGDNYLNGSIPEGLFELPNLTQVELQDNLISGGFPAV

SGTGAPNLGQISLSNNQLTGALPAFIGSFSGVQKLLLDQNAFTGEIPPEIGRLQQLSKADLSGNSFDGGVPPEIG

KCRLLTYLDLSRNNLSGEIPPAISGMRILNYLNLSRNQLDGEIPATIAAMQSLTAVDFSYNNLSGLVPATGQFSY

FNATSFVGNPGLCGPYLGPCHPGLLALSIAFAAMAILKARSLKKASEARAWKLTAFQRLEFTCDDVLDSLKEENI

IGKGGAGTVYKGTMPDGEHVAVKRLPAMSRGSSHDHGFSAEIQTLGRIRHRYIVRLLGFCSNNETNLLVYEYMPN

GSLGELLHGKKGGHLHWDTRYKVAVEAAKGLCYLHHDCSPPILHRDVKSNNILIDSDFEAHVADFGLAKFLQDSG

TSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGKKPVGEFGDGVDIVQWVKTMTDSNKEHVIKI

LDPRLSTVPVHEVMHVFYVALLCVEEQSVQRPTMREVVQILSELPKPTSKQGEEPPSGEGAVFDLVVPAESAEAN

EAKEQQQQQLNSPSSPPPDLISI

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	94	117	4.5
LRR [Pfam ls]	119	142	0.039
LRR [Pfam ls]	143	164	0.42
LRR [Pfam ls]	167	190	1.9
LRR [Pfam ls]	191	214	0.013
LRR [Pfam ls]	240	263	0.96
LRR [Pfam ls]	288	311	0.019
LRR [Pfam ls]	312	335	0.13
LRR [Pfam ls]	360	384	0.039
LRR [Pfam ls]	408	431	1.8
LRR [Pfam ls]	432	456	8.9
LRR [Pfam ls]	457	480	3.3
LRR [Pfam ls]	481	504	8.2
LRR [Pfam ls]	529	552	0.0024
LRR [Pfam ls]	577	599	4.8
Ser/Thr pkinase [Pfam fs]	670	872	2.5e-51
Ser/Thr pkinase [Pfam ls]	670	919	1.7e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	69	93	0.8
LRR [sensitive, ls]	69	93	16
LRR [sensitive, ls]	94	117	0.22
LRR [sensitive, ls]	94	117	4.5
LRR [sensitive, ls]	119	142	0.0019
LRR [sensitive, ls]	119	142	0.039
LRR [sensitive, ls]	143	164	0.021
LRR [sensitive, ls]	143	164	0.42
LRR [sensitive, ls]	167	190	0.095
LRR [sensitive, ls]	167	190	1.9
LRR [sensitive, ls]	191	214	0.00062
LRR [sensitive, ls]	191	214	0.013
LRR [sensitive, ls]	240	263	0.047
LRR [sensitive, ls]	240	263	0.96
LRR [sensitive, ls]	264	287	0.66
LRR [sensitive, ls]	264	287	13
LRR [sensitive, ls]	288	311	0.00096
LRR [sensitive, ls]	288	311	0.019
LRR [sensitive, ls]	312	335	0.0067
LRR [sensitive, ls]	312	335	0.13
LRR [sensitive, ls]	336	359	0.48
LRR [sensitive, ls]	336	359	9.6
LRR [sensitive, ls]	360	384	0.0019
LRR [sensitive, ls]	360	384	0.039
LRR [sensitive, ls]	408	431	0.087
LRR [sensitive, ls]	408	431	1.8
LRR [sensitive, ls]	432	456	0.44
LRR [sensitive, ls]	432	456	8.9
LRR [sensitive, ls]	457	480	0.17
LRR [sensitive, ls]	457	480	3.3
LRR [sensitive, ls]	481	504	0.41
LRR [sensitive, ls]	481	504	8.2
LRR [sensitive, ls]	505	528	1.6
LRR [sensitive, ls]	505	528	32
LRR [sensitive, ls]	529	552	0.00012
LRR [sensitive, ls]	529	552	0.0024
LRR [sensitive, ls]	553	576	0.74
LRR [sensitive, ls]	553	576	15
LRR [sensitive, ls]	577	599	0.24
LRR [sensitive, ls]	577	599	4.8

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	24	758	1e-86
FLS2 [A.thaliana]	27	595	7e-87
CLV2 [A. thaliana]	30	613	1e-56
Cf-9 [L. pimpinellifolium]	47	614	1e-58
FLS2 [A.thaliana]	73	944	1e-130
Pto [L. esculentum]	644	938	3e-39
Rpg1 [Hordeum vulgare]	655	944	5e-39
Rpg1 [Hordeum vulgare]	658	944	2e-29

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	26	in -> out

Report for 2338.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)