Report for 2338.m00145

 > 2338.m00145, length: 591, copies: 1 

MEWPARVDPCGGGWAGVTCRGGRVVGVTVAGFRRTRVGARAPRFAVDGVRNLTALEVFNASGFPLPGEMPAWFGR

GLPPPLAVLDLRSAAVNGTLPPDLGVSGNLTSLLLSGNSLSGAVPGSLLSVAGLRFLDLSGNNFTGGLPNVTPVA

GGGAASLFNVSGNSLYGVVSDAIGALKGRFQVVDLSSNYFDGVWNVSDGNVDVRMNCFSGAPGQRNRVDCEEFYR

RAGVRLGDALAPAPSPETSPGTTTKNNNSRISKGVLIGVIAAAATLMVVFFGALVFCLARQKAGRRGARGRGVDT

NEESTRGVRRRDSSVNPVTSPPVAVSPSANSGHKDPVVVSGEFTFEQLVHATGGFGDDNLLKHGHSGDIYHGVFE

SGSHVVVKKGQRTERQQACRIVPLLGHLAKDEEEFMAYKYMPKGDLTNALHKKPVDTEDGLPSLDWITRLKIATG

VAEAMCFLHDECRPPLVHRDIQATSVLLDDKFEVRLGSMSDVCAQQSGGSQSVFSRLLRSSRSLDKNISGPPATC

SYDVYCFGKVMLELVTGNFGVSGSNDAASEEWMTNTLNRIDMNDKESISRIIDPLLIVDEDHLETR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	104	127	2.4
LRR [Pfam ls]	128	148	0.29
Ser/Thr pkinase [Pfam fs]	415	471	5.1e-06

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	104	127	0.12
LRR [sensitive, ls]	104	127	2.4
LRR [sensitive, ls]	128	148	0.014
LRR [sensitive, ls]	128	148	0.29
LRR [sensitive, ls]	154	177	4.7
LRR [sensitive, ls]	154	177	95

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	49	578	1e-16
Xa21 [O. sativa]	65	210	3e-11
Pto [L. esculentum]	340	581	6e-14
Rpg1 [Hordeum vulgare]	342	564	5e-12

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	259	281	in -> out

Report for 2338.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)