Report for 2339.m00155

 > 2339.m00155, length: 508, copies: 1 

MADFYSPSHASRRLSTSITFAGGLDVTSELVIAAVAAALLLVLLFAACACCSWCCRRRSATQRWQNHHAAAFGYQ

GNTTAYYYHHTGGARPQWAATKTGAPSTPPNMMMHPTNMTGPHVVVRPPLVPPPPPPVPAGLDENAFGYDELAAA

TGGFSEGNMLGQGGFGYVYRGVLGDGKEVAVKQLSAGGGQGEREFQAEVDMISRVHHRHLVPLVGYCIAGAQRLL

VYDFVPNRTLEHHLHEKGLPVMKWTTRLRIAVGSAKGLAYLHEECNPRIIHRDIKSANILLDNNFEPLAPDFGMA

KLTSENVTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSYGVMLLELLTGRRPADRSSYGADCLVDWARQALPRA

MAPGGGGGYDDIVDPAAARRVRPGGGGARRRLRRRLRPPRRQEAPQDEPGGEGARGGRVAGGARRRRAARAERHV

VQQRRLQLGVGIVHGADGAGQADGGVAGQPGVLQQRVPGLRMPVAGQQRRRQRVFRRA

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	154	353	6.5e-39
Ser/Thr pkinase [Pfam ls]	154	412	6.8e-30

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	119	351	2e-27
FLS2 [A.thaliana]	131	382	5e-32
Pto [L. esculentum]	142	398	2e-50
Rpg1 [Hordeum vulgare]	142	359	3e-30

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	31	53	out -> in

Report for 2339.m00155

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)