Report for 2372.m00196

 > 2372.m00196, length: 543, copies: 1 

MASAAEAVEELTRLYRELPPRPAVEEVEAAEAVLASADAEEAARLDEVAREEASASASSSAAAPGRADGELLAVL

REARRNAVRLRALQQRKEAAYVVELERRFKVFDDLIQRASRVVSSSSDAAEAGGGTTGDGYVGVGADSVDLEMEL

RKKEAAVAAAAAVAEMERGSKGLAALGLESKPISSLRRDVSAGTDMEKLSLIQVASLIESSAKKGITELSLRGKL

VDQIEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKS

LPSSFGNLTSLANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALPEAIG

KLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNLSRNFADLRALPKSIGNLEM

LEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREVVKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWTW

LFSLFGCCKKNQEVGLPV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	241	263	0.67
LRR [Pfam ls]	264	286	0.12
LRR [Pfam ls]	287	309	0.0081
LRR [Pfam ls]	310	332	0.51
LRR [Pfam ls]	356	378	0.15
LRR [Pfam ls]	379	401	0.44
LRR [Pfam ls]	402	424	0.57
LRR [Pfam ls]	425	449	5.6
LRR [Pfam ls]	450	472	0.025

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	241	263	0.029
LRR [sensitive, ls]	241	263	0.67
LRR [sensitive, ls]	264	286	0.005
LRR [sensitive, ls]	264	286	0.12
LRR [sensitive, ls]	287	309	0.00035
LRR [sensitive, ls]	287	309	0.0081
LRR [sensitive, ls]	310	332	0.022
LRR [sensitive, ls]	310	332	0.51
LRR [sensitive, ls]	333	355	0.26
LRR [sensitive, ls]	333	355	6.1
LRR [sensitive, ls]	356	378	0.0062
LRR [sensitive, ls]	356	378	0.15
LRR [sensitive, ls]	379	401	0.019
LRR [sensitive, ls]	379	401	0.44
LRR [sensitive, ls]	402	424	0.024
LRR [sensitive, ls]	402	424	0.57
LRR [sensitive, ls]	425	449	0.24
LRR [sensitive, ls]	425	449	5.6
LRR [sensitive, ls]	450	472	0.0011
LRR [sensitive, ls]	450	472	0.025

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	216	487	3e-16
Xa21 [O. sativa]	231	456	1e-15
FLS2 [A.thaliana]	232	461	3e-22
FLS2 [A.thaliana]	232	475	1e-13
FLS2 [A.thaliana]	232	459	3e-12
Xa21 [O. sativa]	232	484	1e-18
Xa21 [O. sativa]	232	459	2e-18
CLV2 [A. thaliana]	235	478	1e-12
N [N. glutinosa]	277	502	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2372.m00196

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)