Report for 2419.m00145

 > 2419.m00145, length: 664, copies: 1 

MAAGGRCCFRRGAPAAVLVLPLLLLIAAAALPRRALAATVAADVAAINGLYVALGSPALPKWTANGGDPCGDGWQ

GVVCIGSNIDSIIFNAANLEGQLGSLGNFTSITTINLSNNNIGGTIPEDLPVTLQHFFMSDNQLTGSIPTSLSML

QSLTDMSLNDNHLDGKLPDAFGSLTGLVNFDISSNNFSGSLPPSLGSLSSLTTLKDGNPFNTSIAPSASPSSTPT

GSTPTQTPSSPSSSGTPSPSSSPSNSSGGSTARDSSSPSSRKHKSSTLRIVGYVLLAIVLFIVTVLLVIFCLSKY

QERQSRRDYTTSQVGRVHQRVEEPKVKQASVQSRNDAKKGSTEVPERRQMYKITIQLLAAALEKPPEKRKEHQYT

NSFEEGNLIRESRLGKVYLAELPEGRFLEVMKIDNANDRIPVDEFLELVASVSDIRHPNILELVGYCAEYGQRLL

VYNHFSRKTLHDVLHEGEELDGALSWNARLQVALGAAKALDYLHESCEPPVVHQNFEPANVLLGNGFSVRVAECG

LAELTLSGSVTQLSGRMRALLNYEAPEIHEAGTFTYRSDVYSFGVVMLELLTGRKPYDSSRPRAEQHLVRWADSQ

FHDIESISKMVDPSIQGECSEKVLSRFADIISRCIRPEPEFRPSMSEIVQDLARIISVTSEESE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	106	126	0.082
LRR [Pfam ls]	128	151	6.4
LRR [Pfam ls]	152	175	1
LRR [Pfam ls]	176	199	1.1
Ser/Thr pkinase [Pfam ls]	378	654	5.2e-14
Ser/Thr pkinase [Pfam fs]	430	652	6.7e-17

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	106	126	0.004
LRR [sensitive, ls]	106	126	0.082
LRR [sensitive, ls]	128	151	0.31
LRR [sensitive, ls]	128	151	6.4
LRR [sensitive, ls]	152	175	0.048
LRR [sensitive, ls]	152	175	1
LRR [sensitive, ls]	176	199	0.053
LRR [sensitive, ls]	176	199	1.1

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	55	204	8e-19
FLS2 [A.thaliana]	78	218	7e-11
FLS2 [A.thaliana]	79	204	3e-12
Xa21 [O. sativa]	80	206	3e-11
Xa21 [O. sativa]	82	208	4e-15
Xa21 [O. sativa]	82	206	7e-15
Cf-9 [L. pimpinellifolium]	83	205	4e-12
FLS2 [A.thaliana]	83	207	1e-14
FLS2 [A.thaliana]	83	204	1e-10
FLS2 [A.thaliana]	101	655	5e-40
FLS2 [A.thaliana]	105	205	1e-13
Xa21 [O. sativa]	110	465	3e-11
Rpg1 [Hordeum vulgare]	365	655	1e-15
Pto [L. esculentum]	375	652	6e-33
Rpg1 [Hordeum vulgare]	375	655	1e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	12	31	in -> out
putative TM domain	35	54	out -> in
putative TM domain	275	297	in -> out

Report for 2419.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)