Report for 2440.m00229

 > 2440.m00229, length: 553, copies: 1 

MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVKSRMRDEKGVMGGWDINSVDPCTWSMVACSPD

GFVVSLQMANNGLAGTLSPSIGNLSHLQTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTEL

NYLRLDKNNLSGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYRWRLPFASADQDLEIELGHLKHFSFHELQ

SATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDITGEVQFQTEVELIGLAVHRNLLRLYGFCMTSKER

LLVYPYMPNGSVADRLRDYHHGKPSLDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGD

FGLAKLLDRQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQKGMILDWVR

EVKEENKLDKLVDRDLKYSFDFAELECSVDVILQCTQTNPILRPKMSEVLNALEANVTLPENGIDLNREVPPYGG

SCSFSVRHEDPHDSSSFIIEPIELSGPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	101	124	0.14
LRR [Pfam ls]	125	148	0.011
LRR [Pfam ls]	149	172	0.33
Ser/Thr pkinase [Pfam fs]	231	429	6.8e-50
Ser/Thr pkinase [Pfam ls]	231	505	6.4e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	77	100	0.96
LRR [sensitive, ls]	77	100	20
LRR [sensitive, ls]	101	124	0.0069
LRR [sensitive, ls]	101	124	0.14
LRR [sensitive, ls]	125	148	0.00054
LRR [sensitive, ls]	125	148	0.011
LRR [sensitive, ls]	149	172	0.016
LRR [sensitive, ls]	149	172	0.33
LRR [sensitive, ls]	173	195	0.56
LRR [sensitive, ls]	173	195	12

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	26	186	3e-15
CLV2 [A. thaliana]	28	189	3e-16
FLS2 [A.thaliana]	28	190	1e-25
Xa21 [O. sativa]	39	192	3e-25
FLS2 [A.thaliana]	53	189	1e-13
FLS2 [A.thaliana]	68	503	1e-49
FLS2 [A.thaliana]	74	190	2e-14
Xa21 [O. sativa]	77	189	2e-20
CLV2 [A. thaliana]	78	189	3e-12
FLS2 [A.thaliana]	78	188	4e-18
FLS2 [A.thaliana]	78	189	1e-14
Xa21 [O. sativa]	78	316	8e-21
CLV2 [A. thaliana]	80	186	3e-14
FLS2 [A.thaliana]	80	237	4e-12
FLS2 [A.thaliana]	80	193	4e-18
FLS2 [A.thaliana]	80	190	9e-16
FLS2 [A.thaliana]	80	189	5e-12
Cf-9 [L. pimpinellifolium]	81	190	7e-12
CLV2 [A. thaliana]	81	189	2e-14
FLS2 [A.thaliana]	81	189	2e-13
FLS2 [A.thaliana]	81	190	3e-15
FLS2 [A.thaliana]	81	204	2e-14
FLS2 [A.thaliana]	81	190	4e-11
Xa21 [O. sativa]	81	190	2e-18
Xa21 [O. sativa]	81	189	5e-13
Xa21 [O. sativa]	81	189	2e-11
FLS2 [A.thaliana]	86	189	5e-16
Xa21 [O. sativa]	86	189	3e-18
Rpg1 [Hordeum vulgare]	212	503	1e-39
Pto [L. esculentum]	219	514	3e-48
Rpg1 [Hordeum vulgare]	219	504	9e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	7	24	in -> out

Report for 2440.m00229

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)