Report for 2444.m00109

 > 2444.m00109, length: 472, copies: 2 

MEGRERRRSMSSSSSGRRTPELERERWAPWSPAPTWSRPLSVGGGGSRAASLKSLFRTIGLWFSSLSTSSSSSSS

AAATSASGSNAKRRSRREPNDLIKKPPLPGPGSDQGKASMRGLYNSSRGRGIATQFQSSVFSMEEILRATNNFSP

ALKVGQGGFGAVYRGVLPDGTLVAVKRAKLRDQNPHVDVEFRSEVKAMARIEHQSLVRFYGYLECGQERVIVVEF

VPNGTLREHLDRCNGRFLDMGARLEIAIDVAHAVTYLHMYADHPIIHRDIKSSNVLLTPSLRAKVGDFGFARLGV

GEAGAADGVTHVTTQVKGTAGYLDPEYLKTCQLTDRSDVYSFGVLLLEIASGRRPIEARREMRERLTARWAMRKL

AEGAAADVLDPHLPRTPATARAAEMVMELAFRCLAPVRQERPSMGECCRALWAVRKTYRDMVVAAAGDETPLSSI

SDRASSSSAGTGGDRSGELWRN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam ls]	148	428	2.6e-44
Ser/Thr pkinase [Pfam fs]	153	428	6.4e-44

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	128	434	2e-45
Rpg1 [Hordeum vulgare]	131	426	1e-26
FLS2 [A.thaliana]	136	430	1e-35
Rpg1 [Hordeum vulgare]	145	421	2e-22

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2444.m00109

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)