Report for 2462.m00141

 > 2462.m00141, length: 825, copies: 1 

MRELAGNPGTWNGLSCRWASPVFSAASMCATAFPLGFAAYTDVTGDGIFAAIGLATAVARAAPTKSPPRPAARIT

LCRIATGCRRQSMCADVQTEVQEEGKARRGEVVVYDGGGSHLLTQQVNRVKDATNRTMEATTLSVGKSVLNGALG

YAKSAFAEEVALQLGIQKDHTFVADELEMMRSFMMEAHEEQDNSKVVKTWVKQVRDTAYDVEDSLQDFAVHLKKP

SWWRFPRTLLERRRVAKQMKELRNKVEDVSQRNARYHLIKGSGSKATITSAEQSSVIAAAIFGIDDARRAAKQDN

QRVDLVQLINKEDHDLKVIAVWGTSGDMGQTTIIRTAYENPAVQIRFPCHAWVRVMHPFSHESQKGEARKVNPPR

QSHNHERKECSLSGLQGSQNGEDSMKPVSISDVATTSTNDHTVAHGDIIDDQSMDADEKKVVRKSLTRIRTSVGA

SEESQLIGREKEMSEIIDLILKDNSQQVQVISVWGMGGLGKTTLVGGVYQSPKLSDKFDKYVFVTIMRPFNLVEL

LRSLAGRLHEGSSKKEELVENRVSSKKSLASMELDQLTKQLERLLEKKRSLIVLDDFSDTSEWDQIKPMLFPLLE

KTSLIIVTTRKENIANHCSGKNGTVHNLLVLKPNDALCLLSEKSTIKLKLYQCQVFEKATYLDEQKNPELVKEAK

QILKKCDGLPLAIVVIGGFLANRPKTPEEWRKLNENISAELEMNPELGMIRTVLEKSYDGLPYHLKSCFLYLSIF

PEDQIISRRRLVHRWAAEGYSTAAHGKSAVEIVGNLVIIRHILIQNNKIINMIFTIGFDPVTVVNVINMSMLNVE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	440	776	2.1e-64
NB-ARC [Pfam ls]	440	776	7.8e-65

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pib [Oryza sativa].	179	360	8e-92
Pib [Oryza sativa].	391	782	0
N [N. glutinosa]	414	750	2e-11
M [L. usitatissimum]	425	750	6e-11
I2 [L. esculentum]	445	769	1e-33
Pi-ta [Oryza sativa]	450	785	2e-29
Mla1 [Hordeum vulgare].	451	770	8e-33
RPM1 [A. thaliana]	453	793	8e-39
Xa1 [Oryza sativa]	453	770	4e-20
RPS2 [A. thaliana]	456	780	1e-21
Pib [Oryza sativa].	461	645	2e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	236	262
putative coiled-coil	551	578

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2462.m00141

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)