Report for 2477.m00167

 > 2477.m00167, length: 769, copies: 2 

MATTSTLHQAVAYLLAVMLVCLAPVTPASAQPWPGCPDKCGNISISYPFGIGAGCARDKDFQLECDGNTPHFNYL

DDREKKLVSLSIADGEVRVFVDAGSNCHDDRFKAISGHYRTPDYGRSIAYRFSTARNRLVVLGCPVLGYLVDADD

NYVTGCTSTCRRSQSQGDLPGQCTGESGCCQNTMPRALNVYKPYILTLNKTEEPTRNVPDQQELPPTEPVFRHLD

STKCQYVFVAEDKWINTTYSYRAFINRTSDFTVPVVLDWAIRNAGNCDIAVRNRTDYACRSAHSECFNASDGQGY

RCRCSKGYEGNPYLDGGCKDIDECQRTKEYPCFGKCTNTIGSYTCECRPGTSGNATQENGCLPTDKFTLALKVVT

GVSVGVFLLLFMLFWLYLGLQKRKLIRTKQRFFEQNGGVLLQQQMSSYGGTSGGAGGFKIFSKEELEKATNSFAA

DRVLGRGGYGIVYKGVLEDNMVVAIKKSKMIEEAQTKEFAKEMCILSQINHKNVVKLLGCCLEVEVPMLVYEFVS

NGTLDHYIHGSTLNTVISLDSRLRIAAESAEALSYMHSSASPPILHGDVKTANILLDDKLTAKVSDFGTSKLVPN

DEFEIATLVQGTCGYLDPEYLMTCQLTNKSDVYSFGVVLLELLTRKKALYFGGSEEDRSLVSCFMTAVRDGRHEE

LIDSQVRNEMTEEVLQEITHLVMRCVSMSGEERPMMKEVAEKLEMLRRYQLHPWDKGDANPEEKQSLLDMEQRNV

DQKFRHHHDYDPENPACRS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	448	645	6e-45
Ser/Thr pkinase [Pfam ls]	448	720	2.4e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	434	722	7e-40
Pto [L. esculentum]	436	725	5e-50
Rpg1 [Hordeum vulgare]	436	731	2e-33
Rpg1 [Hordeum vulgare]	441	721	5e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	373	395	out -> in

Report for 2477.m00167

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)