Report for 2479.m00110

 > 2479.m00110, length: 496, copies: 1 

MSMRAHQLVSYQQLVHATDGFSTTNLLGTGSYGSVYRGKLFDETGENENLIAVKVLKLQTPGALKSFTAECEAMK

NLRHRNLVKIVTACSSMDFNGNDFKAIVFDFMPNGCLEEWLHPQIDNQLEERHLNLVHRVGILFDVACALDYLHF

HGTTPVVHCDLKPSNVLLDADMVAHVGDFGLAKILSSQPSTSSMGFRGTIGYAPPEYGAGNMVSTHGDIYSYGIL

VLEMITGRRPTDNTCEQGFSLRKCVEMALNNRAMDILDVELVTELENAPPATSMDGPSERVNSLISLLKLGLLCS

GEMPLSRMSTKDIIKELLADTKLSVRPKTSQPQEREESRRKKAGEAEARAHGGGEEGFMEPEKSKEAASQPMEAD

AGGPVDPRELVSSDDEIDYSVEPEFYDPDLDDVDERHETYVNQYRAMFVRNCKVKTDQILREGKGKRKNRKGKAA

DSSTTSEGEKKGAVYHPVCCEVCSTEVGVFDEDEVYHFFNVIPSNS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	21	238	1e-48
Ser/Thr pkinase [Pfam ls]	21	319	5.1e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	2	135	4e-47
Rpg1 [Hordeum vulgare]	10	238	3e-24
FLS2 [A.thaliana]	12	318	5e-43
Pto [L. esculentum]	12	233	3e-20
Rpg1 [Hordeum vulgare]	18	317	2e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2479.m00110

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)