Report for 2493.m00133

 > 2493.m00133, length: 1132, copies: 1 

MIRLFAPCPKLIPLLAIFIISCSLPLAISDDTDTDREALLCFKSQISDPNGALSSWTNTSQNFCNWQGVSCNNTQ

TQLRVMALNVSSKGLGGSIPPCIGNLSSIASLDLSSNAFLGKIPSELGRLGQISYLNLSINSLEGRIPDELSSCS

NLQVLGLWNNSLQGEIPPSLTQCTHLQQVILYNNKLEGRIPTGFGTLRELKTLDLSNNALTGDIPPLLGSSPSFV

YVDLGGNQLTGRIPEFLANSSSLQVLRLMQNSLTGEIPAALFNSSTLTTIYLNRNNLAGSIPPVTAIAAPIQFLS

LTQNKLTGGIPPTLGNLSSLVRLSLAANNLVGSIPESLSKIPALERLILTYNNLSGPVPESIFNMSSLRYLEMAN

NSLIGRLPQDIGNRLPNLQSLILSTIQLNGPIPASLANMTKLEMIYLVATGLTGVVPSFGLLPNLRYLDLAYNHL

EAGDWSFLSSLANCTQLKKLLLDGNGLKGSLPSSVGNLAPQLDWLWLKQNKLSGTIPAEIGNLKSLTILYMDDNM

FSGSIPQTIGNLTNLLVLSFAKNNLSGRIPDSIGNLSQLNEFYLDRNNLNGSIPANIGQWRQLEKLNLSHNSFSG

SMPSEVFKISSLSQNLDLSHNLFTGPILPEIGNLINLGSISIANNRLTGDIPSTLGKCVLLEYLHMEGNLLTGSI

PQSFMNLKSIKELDLSRNRLSGKVPEFLTLFSSLQKLNLSFNDFEGTIPSNGVFGNASRVILDGNYRLCANAPGY

SLPLCPESGLQIKSKSTVLKIVIPIVVSAVVISLLCLTIVLMKRRKEEPNQQHSSVNLRKISYEDIAKATDGFSA

TNLVGLGSFGAVYKGLLAFEDNPVAIKVFNLNKYGAPTSFNAECEALRYIRHRNLVKIITLCSTVDPNGYDFKAL

VFQYMPNGSLEMWLHPEDHGHGKQRFLTLGERINVALDIAYALDYLHNQCVSPLIHCDMKPSNVLLDLEMTAYVS

DFGLARFMCANSTEAPGNSTSLADLKGSIGYIAPEYGMGAQISTKGDVYSYGVLLLEILTGKRPTDEKFKDGRSL

HELVDTAFPHRVTEILDPNMLHNDLDGGNFEMMQSCVLPLVKLALMCSMASPKDRLGMAQVSTEIHSIKQEFLDL

SSGGKIV

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	103	126	3.4
LRR [Pfam ls]	127	150	2.7
LRR [Pfam ls]	151	174	0.083
LRR [Pfam ls]	175	198	0.35
LRR [Pfam ls]	199	222	0.0034
LRR [Pfam ls]	223	246	5.6
LRR [Pfam ls]	247	270	5.4
LRR [Pfam ls]	295	318	1.5
LRR [Pfam ls]	319	342	2.5
LRR [Pfam ls]	343	366	0.46
LRR [Pfam ls]	367	391	0.7
LRR [Pfam ls]	439	465	0.78
LRR [Pfam ls]	466	489	1.3
LRR [Pfam ls]	491	514	1.2
LRR [Pfam ls]	515	538	0.3
LRR [Pfam ls]	539	562	1.8
LRR [Pfam ls]	587	611	0.033
LRR [Pfam ls]	636	659	6.3
LRR [Pfam ls]	660	683	0.072
LRR [Pfam ls]	684	706	0.26
LRR [Pfam ls]	708	732	0.8
Ser/Thr pkinase [Pfam fs]	823	1054	4.4e-43
Ser/Thr pkinase [Pfam ls]	823	1083	4e-38

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	103	126	0.16
LRR [sensitive, ls]	103	126	3.4
LRR [sensitive, ls]	127	150	0.13
LRR [sensitive, ls]	127	150	2.7
LRR [sensitive, ls]	151	174	0.004
LRR [sensitive, ls]	151	174	0.083
LRR [sensitive, ls]	175	198	0.017
LRR [sensitive, ls]	175	198	0.35
LRR [sensitive, ls]	199	222	0.00016
LRR [sensitive, ls]	199	222	0.0034
LRR [sensitive, ls]	223	246	0.27
LRR [sensitive, ls]	223	246	5.6
LRR [sensitive, ls]	247	270	0.26
LRR [sensitive, ls]	247	270	5.4
LRR [sensitive, ls]	271	293	0.55
LRR [sensitive, ls]	271	293	11
LRR [sensitive, ls]	295	318	0.074
LRR [sensitive, ls]	295	318	1.5
LRR [sensitive, ls]	319	342	0.12
LRR [sensitive, ls]	319	342	2.5
LRR [sensitive, ls]	343	366	0.022
LRR [sensitive, ls]	343	366	0.46
LRR [sensitive, ls]	367	391	0.034
LRR [sensitive, ls]	367	391	0.7
LRR [sensitive, ls]	392	415	0.87
LRR [sensitive, ls]	392	415	18
LRR [sensitive, ls]	416	438	1.2
LRR [sensitive, ls]	416	438	25
LRR [sensitive, ls]	439	465	0.038
LRR [sensitive, ls]	439	465	0.78
LRR [sensitive, ls]	466	489	0.062
LRR [sensitive, ls]	466	489	1.3
LRR [sensitive, ls]	491	514	0.06
LRR [sensitive, ls]	491	514	1.2
LRR [sensitive, ls]	515	538	0.014
LRR [sensitive, ls]	515	538	0.3
LRR [sensitive, ls]	539	562	0.086
LRR [sensitive, ls]	539	562	1.8
LRR [sensitive, ls]	563	586	0.52
LRR [sensitive, ls]	563	586	11
LRR [sensitive, ls]	587	611	0.0016
LRR [sensitive, ls]	587	611	0.033
LRR [sensitive, ls]	612	635	5.2
LRR [sensitive, ls]	612	635	110
LRR [sensitive, ls]	636	659	0.3
LRR [sensitive, ls]	636	659	6.3
LRR [sensitive, ls]	660	683	0.0035
LRR [sensitive, ls]	660	683	0.072
LRR [sensitive, ls]	684	706	0.013
LRR [sensitive, ls]	684	706	0.26
LRR [sensitive, ls]	708	732	0.039
LRR [sensitive, ls]	708	732	0.8

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	11	1119	1e-165
Xa21 [O. sativa]	14	604	5e-81
CLV2 [A. thaliana]	17	749	2e-69
Cf-9 [L. pimpinellifolium]	55	740	7e-71
Cf-9 [L. pimpinellifolium]	60	284	2e-14
Xa21 [O. sativa]	83	311	3e-23
Xa21 [O. sativa]	225	934	1e-155
Rpg1 [Hordeum vulgare]	809	1118	1e-25
Pto [L. esculentum]	814	1111	3e-24
Rpg1 [Hordeum vulgare]	820	1037	1e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2493.m00133

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)