Report for 2496.m00103

 > 2496.m00103, length: 888, copies: 2 

MNICAAILLFYILQFVHGQPDSQGSTQWKATADSQCSHVSFRGFISIDCGIPEKSSYQDPTSSIIYVSDYGFIST

GANHNISSAYIKPSLAQRNYNVRFFPDGTRNCYTLRSLQEGNKYFVRAVFYYANYDSLNKLPVFDLYLGANYWHE

VKFSNADAVNWMDIIVVAPADYLQVCLVNKGTGTPFISGLDLRPLKSTLYPEANTTQSLVLINSNRFNMGPTDNS

ITRYPLDPHDRLWSTYDTIPDWTEISATSVVQNYLTDVYDVPSAVMQSAATVNSSRINFTWDPSDPSVNISSKYF

FVLYFSELQSVPSNGLRQFDIIVNNNTWNTQPYTPPFLFADSLSGTVQGLASYSVSLVATKNATLPPILNAMEMY

LVKPLTEFATDPRDARAMMEVQQNYDVKKNWMGDPCAPKAFAWEGLNCSYPPADSSKITSLNLSSSGLAGSIATY

FGDLKSLQYLDLSSNDLSGPIPYNLLQKSQNGSLSLRVGYNAKLCGNDTECGSGQKKIKGSLLSAIIITIVATVA

LIVVLFLLLRRMLKAKDKRRAAGPTYESALLENREFSYRELKHITNNFSQQVGKGGFGAVFLGYLENGNPVAVKV

RSESSSQGGKEFLAEAQHLTRIHHKNLVSLIGYCKDKNHLALVYEYMPEGNLQDHLRATTNKPLTWEQRLHIALD

AAQGLEYLHVACKPALIHRDVKSRNILLTTNLGAKIADFGLTKFYQVTELPCHILPILFRYYRNYHISEKSDVYS

FGVVLLELITGRPPVIPIDESVSIHIGEFVHQSLDHGSIESIVDARMGGGGGYDINSVWKVADLALHCKREVSRE

RPTMTEVVAQLKESLELESHGDRKHLVTGDDDVSVSNLGEETALEVEEQSGEISRVSPGPAVR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	432	455	7.5
LRR [Pfam ls]	456	480	0.078
Ser/Thr pkinase [Pfam fs]	571	720	4.8e-41
Ser/Thr pkinase [Pfam ls]	571	838	4.9e-45
Ser/Thr pkinase [Pfam fs]	741	786	1.6e-05

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	432	455	0.36
LRR [sensitive, ls]	432	455	7.5
LRR [sensitive, ls]	456	480	0.0037
LRR [sensitive, ls]	456	480	0.078

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	428	670	3e-19
FLS2 [A.thaliana]	433	836	4e-38
Rpg1 [Hordeum vulgare]	555	836	3e-31
Pto [L. esculentum]	557	843	9e-50
Rpg1 [Hordeum vulgare]	560	847	4e-18

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	512	534	out -> in

Report for 2496.m00103

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)