Report for 2541.m00140

 > 2541.m00140, length: 889, copies: 2 

MSSSLLVAACAVSFVLLCSAATSPASAAVYGVGGGLLSIPSNDSLAHCPSRCGDVGIDYPFGIAPGCFREGFELI

CRNTAKTPKLFLGDGTTEITDLGYRYVLAQIYFNITVRPGTDTYNISWVAPTEGITIDHYNTFYVIGCNFDATLF

EYGTEDLIGSCMSRCDGEKAPIGGPCNGMGCCFIELPRVLRGFQSTIILRSDGIPVAQTDPVHPGIMAFMSSDYY

ISNTSDLFLGWTNTSNVEGTVLSFATIDQPSCERARMNNTSYACSPGSNCRNVSSGGYHCYCSGYEQGNPYLLDG

CTDYNPKYKEHCSTSCGDMKIPFPFGVEEGCFANERFRLNCTEGNLTVCELGEAQYHVTAVSLDDGTLTVGNMMN

DTNYEKEAIIVQTTDTGRDYSFSGPVEDRFDLSMEYAIVIRWAVTNLTCEVAVQKNTTYACRSSHSYCLNVTHRK

EFMGYRCKCSPGFEGNPYIEDGCTGIAIGIGCGLGSIVIVLGAMILANKWRKGIQKRIRRAYFKKNQGLLLEQLI

SNESATNKTKIFSLEELEEATNNFDGTRVLGRGGHGTVYKGILSDQRVVAIKKSKIVEQTEIDQFINEVVILSQI

IHRNVVKIFGCCLESEVPLLVYEFISNGTLHDHLHTDLSVRCSLSWDDRIRIAVEAAGALSYLHSAAAIPIFHRD

VKSSNILLDGSFTTKVSDFGASRSVSLDETHVVTIVQGTFGYLDPEYYHTGQLTEKSDVYSFGVILVELLIRKKP

IFINEAGAKQSLSHYFVEGLQEGSLMEIIDPQVVEEANKEEIDGIASLTMACLKVKGVDRPTMKEVEMRLQFLKT

KRLRKFQLLPGNDGEIEHLLSPNTSNSYAQNIYTNAGDLTSEGIPGSGCYSLEQELSSSISLPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	549	753	5.2e-42
Ser/Thr pkinase [Pfam ls]	549	822	3.4e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	476	826	1e-41
Pto [L. esculentum]	525	822	3e-56
Rpg1 [Hordeum vulgare]	533	816	2e-31
Rpg1 [Hordeum vulgare]	537	820	2e-27

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out
putative TM domain	475	497	out -> in

Report for 2541.m00140

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)