Report for 2558.m00205

 > 2558.m00205, length: 466, copies: 1 

MVEIVFAAVGAAALLVLLVAACLCCSRKTAPRRKRKKKPHNPVTHFDADTSGSKGGGGRDTSGPKPPPPPPWLAE

PRAAPSTSDAAGMSKGTFTYEQLAAATGGFAEENLVGQGGFGYVHKGVLAGGKAVAVKQLKSGSGQGEREFQAEV

DIISRVHHRHLVSLVGYCIAGARRVLVYEFVPNKTLEFHLHGKGLPVMPWPTRLRIALGSAKGLAYLHEDCHPRI

IHRDIKSANILLDNNFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSYGVMLLELVT

GRRPIDAGAADHPWPASFMEDDSLVEWARPAMARALADGDYGGVADPRLEGSYDAVEMARVVASAAASVRHSAKK

RPKMSQIVRALEGDMSLEDLNEGMRPGQSMVFGTAETGGSISEASGSYTFDMDRIIQEATAARLESGRRDDVSFS

GEMSAEWKQPPHRVSR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	105	315	3.7e-48
Ser/Thr pkinase [Pfam ls]	105	388	2.6e-41

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	1	344	3e-34
Rpg1 [Hordeum vulgare]	54	302	2e-26
Pto [L. esculentum]	77	394	1e-53
Xa21 [O. sativa]	77	191	1e-10
Rpg1 [Hordeum vulgare]	93	302	1e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	4	26	out -> in

Report for 2558.m00205

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)