Report for 2559.m00112

 > 2559.m00112, length: 520, copies: 1 

MSTGETLRAELSSRTPPFGLRLWIVIGISIWVVIFFILGFMCLWSIYRRKPKKSFDKIPVSQIPDVSKEIAVDEV

REHAVVENFRVQESHAISVQEKHYEKDSGKMLAHLVRSKSSDADNLSQCSSVYQCDRAGSSYSGDEGSSGNARRH

FSQYATVSASPLVGLPEFSHLGWGHWFTLRDLEHATNRFSKENVIGEGGYGVVYRGRLINGTDVAIKKLLNNMGQ

AEKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNNGNLEQWLHGAMRQHGVLTWEARMKVVLGIAKAL

AYLHEAIEPKVVHRDIKSSNILIDEEFNGKLSDFGLAKMLGAGKSHITTRVMGTFGYVAPEYANTGLLNEKSDVY

SFGVLLLEAVTGRDPVDYGRPANEVHLVEWLKMMVGTRRSEEVVDPDMEVKPTIRALKRALLVALRCVDPDSEKR

PTMGHVVRMLEAEDVPSREVDRRSRRGNTANADTESKTSSSEFEISGDRRDSGPSARRLLDYQYEPLSLF

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	189	460	1.3e-51
Ser/Thr pkinase [Pfam ls]	189	460	2.7e-51

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	134	461	4e-55
FLS2 [A.thaliana]	177	460	7e-37
Rpg1 [Hordeum vulgare]	177	472	5e-43
Rpg1 [Hordeum vulgare]	177	465	1e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	22	44	in -> out

Report for 2559.m00112

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)