Report for 2576.m00145

 > 2576.m00145, length: 955, copies: 1 

MAPLCCCLLRARRLLFFFFFFFFFFFAVAVVLFSSVSVAQIPGFQSIDCGGSGNYTDEVGLEWTGDEAYVGGGAG

TTASISSISGQGRRPYRTVRYFPADGRKYCYRVSVKARTRYLVRASFLYGNFDGSRVFPEFDLYVGASRWSTIVI

YDESKVVTREMVALAQSGPSLSVCLANATTGHPFISTLELRPLNASLYHTAFEAAFFLSLAARINFGAPTADPVR

YPDDPYDRVWESDMARRPNFLVDAAPGTIRVATDNPVFVASGERPPQKVMQTAVVGTLGALTYRLDLNGFPGSGW

ACSYLAEIEDDAAATARRFKLYIPGLAEVSKPTVDIGENAPGKYRVYQPGYDNISLPFVLPFAFRKTDDSARGPI

LNAMEIYSYIPILPASPDAVAMDALAARYQQQQHSWAREGGDPCVPAPWSWLTCTSSRVIAIRLDNNMLTGPIPD

LSACTNLTVIHLENNQLEGGVPSYLSGLPKLSELYLENNRLSGVIPRALLSRTIVFKYSGNKHVRVGKQEEEERN

VIIGICALMGIGLLLAAALCYAYNVSVSGRKQLQGASAGGNSKSKSIVVSAEQKKKATPVAGGGGGEIDNMMAAM

AARGPLEFEVRELEEATSKFARKIGSGGFGVVYYGRLGDGREIAVKVASSNESIQGKKQLANEVALLSRIHHRNL

VAFLGYCWERDSSSYMLVYEYMHNGSLKEQLQMMSISWLRRLQVAEDAAKGIEYLHCGCTPAIIHRDIKTSNILL

DAHMRAKVSDLGLSKSNKATNSTTNTITTHVRGTLGYLDPHYYVSQQLTHKSDLYSFGIILLELISGRPPILLTP

GAGAMASLGPWAKSHYESGDIEAIVDPSLRGRYRDVHSVWKVAETAVRCIDADPRGRPSMPEVVKDIQEAIALEM

PSSESERPAASFFSPGAGAAGARSSATVRSHDLVMDNLMYDSSFCDSLNLPRTPR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	456	479	0.017
LRR [Pfam ls]	480	503	0.53
Ser/Thr pkinase [Pfam fs]	618	820	1.7e-43
Ser/Thr pkinase [Pfam ls]	618	894	5.9e-43

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	433	455	0.91
LRR [sensitive, ls]	433	455	18
LRR [sensitive, ls]	456	479	0.00086
LRR [sensitive, ls]	456	479	0.017
LRR [sensitive, ls]	480	503	0.027
LRR [sensitive, ls]	480	503	0.53

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	434	894	2e-39
Xa21 [O. sativa]	439	706	1e-10
Rpg1 [Hordeum vulgare]	607	892	4e-28
Rpg1 [Hordeum vulgare]	607	902	1e-21
Pto [L. esculentum]	608	899	8e-56

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	13	35	in -> out

Report for 2576.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)