Report for 2582.m00201

 > 2582.m00201, length: 646, copies: 3 

MAIAAPLFRLAAAAAVVMGVVSPAVKAAGGGNSSTACPLDLGYVRSFPWDTAPCMPPVANQTACCTTLLSVLGVG

LAARLRATGHFRLPSANASAACLGAFSDELASPPLSLQDTLVPACWPVSSQLAISPSYCAGVTTAKQYVATVGNA

AVLGSLNSSCGSDLADLSLCSSCLAAAIDASGRLVAAAAKGTNPQNCFYLTVLYAAGVSSSAGPTSPGTANCALG

LALSTPSSSSSPASSSNHTNMAVATAIPVASALLVSVIAALLVWRRRQDSIRSKSRRLSGERRLSRPRPNVGSVL

FSLGELAKATCGFAERNLIGRGGFGVVYRGVLDDGSVVAVKKMLDPDMEGGDEEFTNEVEIISHLRHRNLVPLRG

CCISDDDADEGKQMFLVYDYMPNGSLDHYIFKDGGDGGRRPPPLSWAQRRGVVLDVARGLEYLHHGVKPGIYHRD

IKATNILLGTDMRARVADFGLARRSREGQSHVTTRVAGTHGYLSPEYALYGQLTEKSDVYSFGVLVLEVMSGRRA

LDLSDPSGVVLITDWAWALVRAGRAAEVVAAALREREGPAGVHAMERFVLVGILCAHVTVACRPTMPEALRMLEG

DMDVPDLPERPQPYGQRIAFDEGEANFSASSVLSGPPFMDFGDMLR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	313	522	2.9e-49
Ser/Thr pkinase [Pfam ls]	313	600	3.7e-44

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	218	411	6e-13
FLS2 [A.thaliana]	231	598	1e-32
Rpg1 [Hordeum vulgare]	237	523	3e-33
Rpg1 [Hordeum vulgare]	292	525	7e-31
Pto [L. esculentum]	298	599	5e-49

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	247	269	out -> in

Report for 2582.m00201

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)