Report for 2601.m00160

 > 2601.m00160, length: 580, copies: 1 

MSSKFLAIYLLLAFLSHGTCSYMATTASGWDDHDFFRHCPPSRCSKDGPEIRFPHRLESSNTSSACLASCARLAC

SGQDTILHHPILGPCKVTSIDYKEAVINIIHLLPFPCPLQKLMVDSLPPDDYHGCNLYRRIPAKIVSCSKEFTPS

GTSPVPYELDHLQNAAENIFGPISCLSGTGQYFSYLVHAQLYMYLLPLDCRIVSRGSIPIPGSDSCSGPTFKEKA

EKFINFAETTVSWGSFQDGVLDNCMACERQKQLCAFSSRRNQTFCTSHGNHHATSSVAAFVVFSFIMATALYLSL

KSRYDEEVHLKVEMFLRTYGTSKPTRYSFSDVKKITRRFKEQLGQGGFGSVYKGRLPNGVPVAVKMIEHSTGNGE

EFINEVATIGQIHHINIARLLGFCSEGTRHILIYEFMPNESLEKCIFLHDPNTSQELLAPKKMLDVALGIARGME

YLHQGCNQRILHFDIKPNNILLDYNFNPKISDFGLAKLCARDQSIVTLTKARGTMGYIAPELYSRNFGEISYKSD

VYSFGMLVLEMVSGRRNSDPSIENQNEVYFPEWIYEKVITEQDFVLSREMTEEVD

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	337	539	7e-47
Ser/Thr pkinase [Pfam ls]	337	579	2.5e-35

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	227	563	9e-27
Rpg1 [Hordeum vulgare]	323	542	1e-23
Pto [L. esculentum]	326	561	1e-34
Rpg1 [Hordeum vulgare]	326	579	5e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	in -> out

Report for 2601.m00160

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)