Report for 2601.m00174

 > 2601.m00174, length: 639, copies: 1 

MDLPKLLFTVLILSLLNYESSSATAWDDEDFFKTCSSHRCSKHGPEIRFPFRLSTQPPSCGAPGMHLSCSGQDTI

LNHPVLGPCKVTEISYSYATMNVIPPVDSSPHCPLQKLMSKNQSTSVYKPQGPQSQGATLVVCSRDPIPANQYDI

VGPISCLGHNNQFWYLADPYTYMSVLPLDCTVISKGIPMPYSYDKKGRINWDTSNFKETANRVINDVFANDVNMK

ADPVVSVHKVVKHSVGVMMVVVVFDVCHHHQPTTMRDPRNDRGSLLLQLTNFLIFQSATSSVATFVILSLVVATA

FYISLKSRYNKEIHLKVEMFLKTYGTSKPMRYTFSDVKKITRRFKNKLGHGGFGSVYKGELPNGVPVAVKMLENS

LGEGEEFINEVATIGRIHHANIVRLLGFCSEGTRRALIYEFMPNESLEKYIFSNGSNISREFLVPKKMLDIALGI

ARGMEYLHQGCNQRILHFDIKPHNILLDYSFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRSFGAI

SYKSDVYSFGMLVLEMVSGRRNTDPTVENQNEFYFPEWIYERVINGQELVLNMETTQGEKETVRQLAIVALWCIQ

WNPTNRPSMTKVVNMLTGRLQKLQVPPKPFISSENHLAT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	342	618	4.6e-50
Ser/Thr pkinase [Pfam ls]	342	618	1.3e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	293	616	3e-34
Rpg1 [Hordeum vulgare]	323	625	2e-24
Rpg1 [Hordeum vulgare]	328	617	2e-30
Pto [L. esculentum]	331	613	8e-38

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	283	305	out -> in

Report for 2601.m00174

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)