Report for 2601.m00175

 > 2601.m00175, length: 672, copies: 1 

MAIPGAYAHAVQALATGILFVVVSLVLDHVEGRHHKCPSFSCGHLKGVSAPFRRAADPPGCGSKSYELVCSDTNA

TILIDNATYHVNEINYDYRRFWVVDANIAGSTCPLPQWNHLLDQYKRKVSGHRIEIELAPGAYNHAYFVRCSREV

KDNGIYRPVTCASSNYSFIYVLLSSDSDNPGYIESLEPSCGYLAMTLLGDWSTTVPRNASYEDVKKFMREGFAIR

FPRIYGAGSINECLMDSISELRNGIEPRSSTGTAISDRLIVISIIDLHFWFCLIGYPSGILIAFGMWIVKCIAVL

CRFVLVPLAILTFLAHKYWKTRLAIDAVEKFLQMQQVLGPTRYAYTDLTSVTSHFRDKLGQGGYGSVYKGALLSG

DVHVAVKMLNGASTYDGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYEYMPQGSLDKYIFSSERSFSWDK

LNEIAIGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRNKSFVSDRALRGTVGYIAPEM

VSRSFGVISSKCDVYSFGMLLLEMAGGRRNADPNTNPNASQSYYPSWVYGQLTGEQVGETSGAADMHELQKKLCL

VGLWCIQMKSHDRPTMSETIEMLEGDVNALQVPPRPFFCDGDFMPNVMDSYLHSSELTAISEDDGAIEFASN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	353	550	4.1e-49
Ser/Thr pkinase [Pfam ls]	353	625	4.8e-46

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	304	623	1e-27
Pto [L. esculentum]	342	624	1e-41
Rpg1 [Hordeum vulgare]	342	624	2e-28
Rpg1 [Hordeum vulgare]	343	555	1e-31

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	out -> in
putative TM domain	272	294	in -> out

Report for 2601.m00175

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)