Report for 2601.m00177

 > 2601.m00177, length: 654, copies: 2 

MAIHVLVPDAGGRHHRHGCPPFTCGNLSSVSSPFRRRGDPSECGVLSYELNCADDKATIQIDNGTYYVTGINYTD

STFLIVDADISDSPSSCPLPRWNSLREPRFQSLEPSCGYLAMTPLGGRDSVAPVNESLSLSYADVVKSMRKGFRV

QFPFRYRTGSFKQCPMDSIPICLADLEDDCRFLLTPLAVLVFLAHKYWKTRVTIDAVEKFLRMQQMLGPTRYAYT

DITAITGHFREKLGQGGYGSVYKGVLLPGDLHVAVKMLNGNSNCNGEEFISEVATIGMIHHVNVVRLVGFCSEEM

RRALVYEHMPRGSLDKYIYLSERSFSWDKINEIALGIARGINYLHQGALRGTVGYMAPEMVSRSFGVISSKSDVY

SFGMLLLEMAGGRRNVDPNADSSKSKAYYPSWVYDQLIADQQFDEISNVANMHELERKLCLVGLWCIQMKSHDRP

TMSEAIEMLEGGVDALQVPPRPFFCDGDGIGNGMPPPQILHYDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFV

PLGALRGTIDTGGRRNLDMHAENSSQAYYPSWVYDRLTEQQVSAGEISDATAADMHELEWKLYIIGLHCIQMKSH

DRPTMSEVIEMLEGGVVGLQMPPRTFFCDDESMSPMMDSYQFSSGLTEILEEDE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	232	345	2.2e-23
Ser/Thr pkinase [Pfam ls]	232	461	4.9e-17
Ser/Thr pkinase [Pfam fs]	349	385	3.3e-07
Ser/Thr pkinase [Pfam fs]	489	524	1.5e-08

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	171	459	5e-12
Pto [L. esculentum]	221	460	2e-23
Rpg1 [Hordeum vulgare]	221	460	6e-14
Rpg1 [Hordeum vulgare]	222	459	5e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2601.m00177

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)