Report for 2601.m00179

 > 2601.m00179, length: 822, copies: 1 

MVIPGPFFRRSTALQVFSVLCVLRFVVPDPDIEWPLIHGIPACPPFTCGHLSKVASPFHRRGYECGVASYELTCT

DDKATIQIDNGTYFVTGIDYSDSTFWVVDANISDSRNNCPLPRWKRIPYYYDDVSSDDEESSPYNIQVELDPASR

WWSFFVNCSKEINNNVMYSPVACMGTSSSFVYVLTGRLSCYIENLEPSCGYLAMTPLDGMGRVAPAVDSLSYEDV

VKFMRKGFRVQFPFRHHRNRSFKDCLMESIPKSTGIGKLSDWFSLSVTENFMDCATAKIPSPYNILLGIILYALM

FWTMLALEKFLRMQQMLGPTRYAYTDIIAITGHFREKLGQGGYGSVYKGVLLPGDLHVAIKILNGYSNCNGEEFI

SEVATIGRIHHVNVVRLVGFCSEEMRRALVYEYMPRGSLDKHIFSSERRFSWDKLNEIALGIARGINYLHQGCDM

QILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVSDRALRGTVGYMAPEMVSRSFGIISGKSDVYSFGMLL

LEMVGGRRNADPNADSSASKAYYPSWVYDKLIADQQVDEISNFANMHELERKLCLVGLWCIQMKSHDRPTMSEAI

EMLEGGVDALQVPLRPFFCDGDGMPPPQVMDSYFHSSDLSAISEEDDGIAELASQLDEIASLAPCRTEAVRKGTC

RTAPVRKGTCRTAPVRKGTCRTAPVRQHAPVRQYPVELPQFDSTLSNCPSSTVPCRTAPVRQGLRTEEPRAVAAV

VIGSLPSSSPWARLRGAVVRRLSGGSGARRRSGEHGCGRRNEGERGNGAAEGCHVSKTGQKYRRGTSGERFE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	332	529	2.9e-48
Ser/Thr pkinase [Pfam ls]	332	605	2.2e-48

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	321	604	9e-39
Rpg1 [Hordeum vulgare]	321	604	2e-28
Rpg1 [Hordeum vulgare]	322	603	4e-33
FLS2 [A.thaliana]	338	603	4e-26

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	284	306	in -> out

Report for 2601.m00179

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)