Report for 2623.m00146

 > 2623.m00146, length: 670, copies: 2 

MSTWSGAASMPLRSAAGVFSAADNRLKEIDTLVGEIQMDFRSLHTPNCVFNGEEIEDDDDVVDPEYLEIMTLAGQ

IRCGVRELQTALDRKRIYDSSYGDEDRSMEETQGQACWFPSASQLELVIHSLDAQLRHCLLCLAMFPADELIKKK

MLIHYWIGEGIVQSVTAGKDCFTDLLSRGLIQPACQRQHCSKVHYCKIPPIVSNFLVKTAHRMGFYQFDGEGKPM

EDFDSERSRRACLWERQIGGRGDDVNELYGPSSCKDLLTLYNFNRQYVNMDKTWLSKQAEMSTLQLGQWKPSWRH

RIEIVSPETLEAATMCESLKYLSLRGISLIEYIPDSIGNLQNLVVMDLSACHNLEKLSDSIGSLRKLQFLDVSEC

YLLDEMPEGIGSLEELQVLKGFLVGGATSKSNPCRLADLASLPKLRKLSISTGRRALVVQEDELNKLQGCTALES

LTITWGAAAAAQGPKRQLISGVEGSIKGTSMGSELLLPPRLEKLDLRRTPMENLMHLLHPGNAENLKRLYIRGGK

LKSFGDVEGWNVETLRVRFLKVLECDWERLRASFGKLRFLEMRECPNLTSWECDGEGVWREDDDNGTTHSSCSSL

NGGSGGGWSGCGVLMLCYAAGKCRGNFHAKQLSQRGELLTVVWLLVAHFGMGNQYRVEAGHARAKLITEN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	126	167	1.1e-08
LRR [Pfam ls]	342	365	8.9
LRR [Pfam ls]	366	389	9.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	318	341	0.93
LRR [sensitive, ls]	318	341	18
LRR [sensitive, ls]	342	365	0.45
LRR [sensitive, ls]	342	365	8.9
LRR [sensitive, ls]	366	389	0.49
LRR [sensitive, ls]	366	389	9.6
LRR [sensitive, ls]	490	511	5.8
LRR [sensitive, ls]	490	511	110
LRR [sensitive, ls]	515	536	1.5
LRR [sensitive, ls]	515	536	29

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	100	453	1e-16
I2 [L. esculentum]	120	574	1e-10

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Protein of unknown function, DUF594	599	651	2e-13

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2623.m00146

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)