Report for 2682.m00140

 > 2682.m00140, length: 964, copies: 2 

MERSLLPWLLLLLCFADGVFQSRAQPDSKGFISIDCGIQPNTSYVHNTTKISYVADDDFTDGGSNYNVSPEYIKP

QLSQRYYNLRAFPDGARNCYTARSLAPGIKYLIRASFLYGNYDGLNKLPVFHLYIGVNFWTMVNITSLGLGGSRY

EEAIVVVPDDFVQVCLINTGTGTPFISSLELRPLDKRLYPQVNATLGLLQLNRLNFGPTDNSLVRYPDDPHDRFW

GNWDSYTSSLWKEISTASRVDNLDGDIFDAPTAVMQTAVTPRNASGNIYFFWEPWPQPNDPTPPYTVIFHFSELE

ILTNNASRQFYINLNGEPLIDTAYEPTYLTARYLYGLEPLERTSRYNITINATANSTLPPLINAAEIFSIISTAV

IGTDSQDASSMMAIKDKYQVKKNWMGDPCMPKTFAWDKLTCSYPNSSGARIISLNLSSSGLSADISSAFGNLKAL

QYLDLSNNSLTGSIPDVLSQLPSLRVLDLTGNQLSGSIPSGILKRIQDGSLNVRYGNNPNLCINGNSCKAAKKKS

KLAIYTVIPAVLVVLIASVTTLFCLLRRKKQGPMNNSLEQQNEMSTSTSHVLINSGYGDNVSLRLENRRFTYKEL

EKITNKFKRVLGRGGFGYVYHGFLEDGTEVAVKLRSESSSQGAKEFLIEAQILTRIHHKNLVSMISYCKDGIYMA

LVYEYMPEGTLEEHIVGENKKGKILNMEREAQYRIGICTRCIILTIPMDPYALQQTLLGLEYLHKGCNPPIIHRD

VKATNILLNTRLEAKIADFGLSKASSYDNITHVSTNALVGTLGYVDPEYQMTMQATTKSDVYSFGVVLLELVTGK

PAILHEPNPISVIHWTRQRLARGNIEDVVDTCMPSDYDVNGVWKAMDIAFTCTAQASTQRLTMTEVVMQLQECLE

LEDARCAIGDAHNEFYPDPRSDHNLSYNTYVSDRSNDVSQNSGVSMMEHNFGRVPTMASGPAAR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	425	448	2.4
LRR [Pfam fs]	449	472	3.1e-05
LRR [Pfam ls]	449	472	0.0005
LRR [Pfam ls]	473	497	0.0041
Ser/Thr pkinase [Pfam fs]	605	691	3.5e-15
Ser/Thr pkinase [Pfam ls]	605	897	5.8e-37
Ser/Thr pkinase [Pfam fs]	730	828	1.7e-24

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	425	448	0.12
LRR [sensitive, ls]	425	448	2.4
LRR [sensitive, ls]	449	472	2.6e-05
LRR [sensitive, ls]	449	472	0.0005
LRR [sensitive, ls]	473	497	0.00021
LRR [sensitive, ls]	473	497	0.0041

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
CLV2 [A. thaliana]	379	490	1e-10
Xa21 [O. sativa]	412	688	2e-24
FLS2 [A.thaliana]	426	823	4e-50
Pto [L. esculentum]	585	904	1e-44
Rpg1 [Hordeum vulgare]	591	895	5e-31
Rpg1 [Hordeum vulgare]	595	903	4e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	529	551	out -> in

Report for 2682.m00140

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)