Report for 2690.m00127

 > 2690.m00127, length: 214, copies: 2 

MAMAAAWSPALAAVLLAAAVASASNSEGDALYALRRALADPRGVLQSWDPTLVNPCTWFHVTCDRAGRVTRLDLG

NSNLSGHLAPELGHLEHLQYLELYKNNIQGTIPAELGSLKNLISLDLYNNNITGTIPKELGKLSSLVFLRLNDNS

LNGPIPRDLAKISSLKVIDVSNNDLCGTIPTSGPFEHIPLNNFDKNPRLEGPELQGLATYDTNC

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	68	91	0.5
LRR [Pfam ls]	92	115	0.0022
LRR [Pfam fs]	116	139	4.9e-05
LRR [Pfam ls]	116	139	0.00082
LRR [Pfam ls]	140	163	6.4
LRR [Pfam ls]	164	197	8.5

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	68	91	0.025
LRR [sensitive, ls]	68	91	0.5
LRR [sensitive, ls]	92	115	0.00011
LRR [sensitive, ls]	92	115	0.0022
LRR [sensitive, ls]	116	139	4.1e-05
LRR [sensitive, ls]	116	139	0.00082
LRR [sensitive, ls]	140	163	0.33
LRR [sensitive, ls]	140	163	6.4
LRR [sensitive, ls]	164	197	0.43
LRR [sensitive, ls]	164	197	8.5

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	27	180	8e-23
CLV2 [A. thaliana]	30	182	3e-11
Xa21 [O. sativa]	56	182	5e-21
Xa21 [O. sativa]	59	182	6e-11
FLS2 [A.thaliana]	61	179	5e-17
CLV2 [A. thaliana]	62	180	7e-15
CLV2 [A. thaliana]	65	196	5e-11
FLS2 [A.thaliana]	65	180	6e-18
Xa21 [O. sativa]	65	189	2e-18
Xa21 [O. sativa]	66	180	1e-11
Cf-9 [L. pimpinellifolium]	68	182	4e-11
Xa21 [O. sativa]	68	182	4e-14
FLS2 [A.thaliana]	69	180	5e-14
FLS2 [A.thaliana]	69	202	1e-13
FLS2 [A.thaliana]	69	180	9e-13
Xa21 [O. sativa]	71	211	3e-11
CLV2 [A. thaliana]	72	179	3e-14
CLV2 [A. thaliana]	72	180	4e-14
FLS2 [A.thaliana]	72	180	3e-18
FLS2 [A.thaliana]	72	180	2e-16
FLS2 [A.thaliana]	72	182	9e-16
FLS2 [A.thaliana]	72	201	1e-15
FLS2 [A.thaliana]	72	182	2e-15
FLS2 [A.thaliana]	72	180	4e-13
FLS2 [A.thaliana]	72	180	9e-11
Xa21 [O. sativa]	72	180	7e-14
Xa21 [O. sativa]	72	196	2e-12
Xa21 [O. sativa]	72	185	2e-11
Xa21 [O. sativa]	76	180	8e-11
FLS2 [A.thaliana]	77	180	3e-15
FLS2 [A.thaliana]	77	182	8e-14
Cf-9 [L. pimpinellifolium]	90	207	2e-11

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2690.m00127

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)