Report for 2691.m00162

 > 2691.m00162, length: 625, copies: 1 

MASSISSSSITYTLQTALVISSSLLVAADVGGGQSNNHYCPPSSCGDLHNISYPFRLQGDSRDCVAAPRPWYDLS

CSNTGKATIQINTRTYYVSSINYTDLSFLVTDATMQDDDSSCPLPPSDHPPYSTDDLLDRTTTDSYGFLDLATSS

DSAWACFVNCSRPIQDTTSPWYFNEHITGASIPNIARAIFWSELYFTRCRVAGHAYTTKFMTLMVIIVSAIVIIK

LYKVYDTYGYHSICHRYHQALFWLMLAPLVVFIFLAHKYWKTRITIDAVEKFLQMQQMIGPMRYAYTDIIAITSH

FRDKLGQGGYGSVYKGVLLPGNVHVAIKMLSGNSNCNGDEFISEVSTIGRIHHINVVRLVGFCSEEMRRALVYEY

MPRGSLDKYIFSLEKCFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPR

DKSFVPVSAARGTVGYIAPEMISRSFGTISSKSDVYSFGMLLLEMAGGRRNADPNAANSSQAYYPSRVYKQLTRR

ETCEISDIVDMHELEKELCVVGLRCIQMRSSDRPTMSEVIEMLEGGSDDLQVPPKPFFCDDEQPLGVEPYHLSSD

LTAISEAEEDDDDESISLFQSFSYQ

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	299	496	2.6e-49
Ser/Thr pkinase [Pfam ls]	299	570	1.7e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	249	568	2e-27
Pto [L. esculentum]	288	569	2e-40
Rpg1 [Hordeum vulgare]	288	569	3e-28
Rpg1 [Hordeum vulgare]	289	568	1e-34

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	202	224	out -> in
putative TM domain	245	262	in -> out

Report for 2691.m00162

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)