Report for 2691.m00168

 > 2691.m00168, length: 487, copies: 2 

MRGFVGAAVLLVCNLATASAWKDKDFFSACPAKQCGKVEIRYPFRFEPSNTSSSCGLPCMKLTCSDRQETILDIK

NYLGRPYKVTAIDYKRATLTIVPLADDSSLPPTPGCPLPNLISEGALDHRCEPYAMWLLKSINIEFPFRRAVHVS

ESLQTRYNEEIHLKVEMFLKTYGTSKPTRYSFSEIKKIARRFKIKLGQGGFGSVYRGELPNGVPVAVKMLENSKG

EGEEFINEVSTIGRIHHANIVRLLGFCSEGTRRALIYEFMPNESLEKYIFSDGYNILQELLVPNKMLDIALGIAR

GMEYLHQGCNQRILHFDIKPHNILLDYNFSPKISDFGLAKLCARDQSIVTLTAARGTMGYIAPELYSRNFGEISY

KSDVYSFGMLVLEMVSGRRNSDPSVESQNVVYFPEWIYEQVNSGQDLALGREMTQEEKETVRQLAIVALWCIQWN

PKNRPSMTKVVNMLTGRLQNLQVPPKPFLSADSYPVL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	190	466	5.8e-50
Ser/Thr pkinase [Pfam ls]	190	466	1.7e-50

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Rpg1 [Hordeum vulgare]	176	465	5e-29
Pto [L. esculentum]	179	461	4e-38
Rpg1 [Hordeum vulgare]	181	464	8e-24
FLS2 [A.thaliana]	196	464	2e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2691.m00168

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)