Report for 2700.m00169

 > 2700.m00169, length: 672, copies: 1 

MAIPGAYAHAVQALATGILFVVVSLVLDHVEGRHHKCPSFSCGHLKGVSAPFRRAADPPGCGSKSYELVCSDTNA

TILIDNATYHVNEINYDYRRFWVVDANIAGSTCPLPQWNHLLDQYKRKVSGHRIEIELAPGAYNHAYFVRCSREV

KDNGIYRPVTCASSNYSFIYVLLSSDSDNPGYIESLEPSCGYLAMTLLGDWSTTVPRNASYEDVKKFMREGFAIR

FPRIYGAGSINECLMDSISELRNGIEPRSSTGTAISDRLIVISIIDLHFWFCLIGYPSGILIAFGMWIVKCIAVL

CRFVLVPLAILTFLAHKYWKTRLAIDAVEKFLQMQQVLGPTRYAYTDLTAVTSHFRDKLGQGGYGSVYKGVLLSG

DVHVAVKMLNGASTYDGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYEYMPQGSLDKYIFSSERSFSWDK

LNEIAIGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRNKSFVSDRALRGTVGYIAPEM

VSRSFGVISSKCDVYSFGMLLLEMAGGRRNADPNTNPNASQSYYPSWVYGQLTGEQVGETSGAADMHELQKKLCL

VGLWCIQMKSHDRPTMSETIEMLEGDVNALQVPPRPFFCDGDFMPNVMDSYLHSSELTAISEDDGAIEFASN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	353	550	2.3e-50
Ser/Thr pkinase [Pfam ls]	353	625	2.2e-47

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	304	623	2e-27
Pto [L. esculentum]	342	624	5e-42
Rpg1 [Hordeum vulgare]	342	624	1e-28
Rpg1 [Hordeum vulgare]	343	555	6e-32

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	5	27	out -> in
putative TM domain	272	294	in -> out

Report for 2700.m00169

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)