Report for 2712.m00181

> 2712.m00181, length: 1051, copies: 2
MTIMMSLRLELSLVLILTPIVAAVAGGGSSSSSDEATLLAFKAAFRGSSSSALASWNSSTSFCSWEGVTCDRRTP
ARVAALTLPSGNLAGGLPPVIGNLSFLQSLNLSSNELYGEIPPSLGRLRRLEILDIGGNSFSGELPANLSSCISM
KNLGLAFNQLGGRIPVELGNTLTQLQKLQLQNNSFTGPIPASLANLSLLQYLYMDNNNLEGLIPLDLGKAAALRE
FSFQQNSLSGIFPSSLWNLSTLTVLAANDNMLQGSIPANIGDKFPGIQYFGLADNQFSGVIPSSLFNLSSLTIVL
LYGNRFSGFVPPTVGRLKSLRRLYLYGNRLEANNRKGWEFITSLTNCSQLQQLVISDNSFSGQLPNSVVNLSTTL
HKLYLDNNSISGSIPEDIGNLIGLDTLDLGFTSLSGVIPASIGKLSNLVEVALYNTSLSGLIPSSIGNLTNLNRL
YAYYTNLEGPIPASLGKLKTLFVLDLSTNRLNGSIPKEILELPSLSWYLDLSYNSLSGPLPIEVATLANLNQLIL
SGNQLSGQIPDSIGNCQVLESLLLDKNSFEGGIPQSLTNLKGLNILNLTMNKLSGRIPDTIGRIGNLQQLFLAQN
NFSGPIPATLQNLTMLWKLDVSFNNLQGEVPDEGVFKNLTYASVAGNDNLCGGIPQLHLAPCPIIDASKNNKRWH
KSLKIALPITGSILLLVSATVLIQFCRKLKRRQNSRATIPGTDEHYHRVSYYALARGSNEFSEANLLGKGSYGSV
YRCTLEDEGAIVAVKVFNLRQSGSAKSFEVECEALRRVRHRCLIKIITCCSSINPQGHEFKALVFEYMPNGSLDG
WLHPVSGNPTSSNTLSLSQRLGIAVDILDALDYLHNHCQPPIIHCDLKPSNILLAEDMSAKVGDFGISRILPESI
VKALQHSDSIVGIRGSIGYIPPEYGEGSAVSRLGDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPGRV
LDIADRTIWLHEEAKNKDITDASITRSIVQDCLVSVLRLGISCSKQQAKDRMLLADAVSKMHAIRDEYLLSQVVK
K

HMM searches against classifier domains (fs and ls)

DomainBeginEndE-value
LRR [Pfam ls]1011240.12
LRR [Pfam ls]1251451.2
LRR [Pfam ls]1741970.03
LRR [Pfam ls]1982212.2
LRR [Pfam ls]2222458.1
LRR [Pfam ls]2712948.6
LRR [Pfam ls]2953189.9
LRR [Pfam ls]3193457.8
LRR [Pfam ls]3493726.7
LRR [Pfam ls]3743970.05
LRR [Pfam ls]3984214.6
LRR [Pfam ls]4224450.49
LRR [Pfam ls]4464693.3
LRR [Pfam ls]4704946.6
LRR [Pfam ls]5195420.16
LRR [Pfam ls]5435668.1
LRR [Pfam ls]5916140.077
LRR [Pfam ls]6156405.1
Ser/Thr pkinase [Pfam fs]7369551.8e-48
Ser/Thr pkinase [Pfam ls]73610292.3e-43

Searches for specific additional domains (secondary HMMs)

DomainBeginEndE-value
LRR [sensitive, ls]1011240.0061
LRR [sensitive, ls]1011240.12
LRR [sensitive, ls]1251450.062
LRR [sensitive, ls]1251451.2
LRR [sensitive, ls]1491731.2
LRR [sensitive, ls]14917323
LRR [sensitive, ls]1741970.0015
LRR [sensitive, ls]1741970.03
LRR [sensitive, ls]1982210.11
LRR [sensitive, ls]1982212.2
LRR [sensitive, ls]2222450.41
LRR [sensitive, ls]2222458.1
LRR [sensitive, ls]2462700.54
LRR [sensitive, ls]24627011
LRR [sensitive, ls]2712940.43
LRR [sensitive, ls]2712948.6
LRR [sensitive, ls]2953180.5
LRR [sensitive, ls]2953189.9
LRR [sensitive, ls]3193450.39
LRR [sensitive, ls]3193457.8
LRR [sensitive, ls]3493720.34
LRR [sensitive, ls]3493726.7
LRR [sensitive, ls]3743970.0025
LRR [sensitive, ls]3743970.05
LRR [sensitive, ls]3984210.23
LRR [sensitive, ls]3984214.6
LRR [sensitive, ls]4224450.025
LRR [sensitive, ls]4224450.49
LRR [sensitive, ls]4464690.17
LRR [sensitive, ls]4464693.3
LRR [sensitive, ls]4704940.33
LRR [sensitive, ls]4704946.6
LRR [sensitive, ls]5195420.0081
LRR [sensitive, ls]5195420.16
LRR [sensitive, ls]5435660.41
LRR [sensitive, ls]5435668.1
LRR [sensitive, ls]5675907.1
LRR [sensitive, ls]567590140
LRR [sensitive, ls]5916140.0039
LRR [sensitive, ls]5916140.077
LRR [sensitive, ls]6156400.26
LRR [sensitive, ls]6156405.1

BLAST searches against classifier sequences

Query sequenceBeginEndE-value
Xa21 [O. sativa]48461e-166
FLS2 [A.thaliana]56562e-88
CLV2 [A. thaliana]346694e-60
FLS2 [A.thaliana]522405e-21
Cf-9 [L. pimpinellifolium]556754e-59
Cf-9 [L. pimpinellifolium]766579e-50
FLS2 [A.thaliana]775765e-67
FLS2 [A.thaliana]8010401e-129
CLV2 [A. thaliana]2686748e-43
Pto [L. esculentum]70310401e-26
Rpg1 [Hordeum vulgare]7339506e-27
Rpg1 [Hordeum vulgare]7339508e-21

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

DomainBeginEndE-value

NCOILSv2.0 search for coiled-coil domains

DomainBeginEnd

TM-HMM search for transmembrane domains

DomainBeginEndOrientation