Report for 2715.m00180

 > 2715.m00180, length: 661, copies: 2 

MGARWGPRRATVGPHLRDALRHLLFVFLVLLQAQAGRGGATLNGEGMALLELRERVEADPHGALRDWDPADATPC

RWSGVHCFDGKVEILNLTGRELVGTLAPEIGRLQLLKSLILRNNNFRGKIPKEFGGLTALEVLDLSSNNLDGTIP

EELMAMPLLKQLSLHDNQFQDDISSLHIQDISDEQAGCLSRKLGCWYVGYFGLGEPHIMQNLQSFASAVGRRLLG

EVGNLPALSGNYAKSSGPVNSEEIQRAIDVLSLGSGSFSAFPNSEAEVLESAVNTDAAAMQSGAANQSTDEVSGS

KHSKWAYFMIIPAAILLISLIVAPILVWRKRGRAAIGPWKTGLSGPLQKAFVTGVPKLNRPELEAACEDFSNIIN

TFPSCTVFKGTLSSGVEISVVSTAILSLKEWPKSSETCFRKQIDTLSRVNHKNFINLLGYCLENQPFMRMMVFEY

APNGTLSEHLHLKEFEHLDWAARMRIIMGVAYCLQYMHHDLNPPVAITDMRSDTIFMTDDYAAKIADVGIWKEVA

IKAKTAKEDSSSRSECPPDIASNVYCFGTLLIEIISGKLPEADDQKSMCNWAAEYLKGKSYSKLVDASLKEHNAN

ELEAVCEVIQECIDPDSDQRPTMRDATRKLRQALNISPEAATPRLSPLWWAELEILSAEAT

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	110	133	0.081
LRR [Pfam ls]	134	157	0.039
Ser/Thr pkinase [Pfam ls]	381	626	1.9e-09
Ser/Thr pkinase [Pfam fs]	421	461	0.00082

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	86	109	1.6
LRR [sensitive, ls]	86	109	31
LRR [sensitive, ls]	110	133	0.0041
LRR [sensitive, ls]	110	133	0.081
LRR [sensitive, ls]	134	157	0.002
LRR [sensitive, ls]	134	157	0.039
LRR [sensitive, ls]	158	182	1.4
LRR [sensitive, ls]	158	182	27

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Xa21 [O. sativa]	23	175	2e-11
FLS2 [A.thaliana]	48	173	2e-12
FLS2 [A.thaliana]	86	176	4e-12
FLS2 [A.thaliana]	90	625	5e-25
FLS2 [A.thaliana]	90	264	8e-12
Xa21 [O. sativa]	90	461	2e-12
Pto [L. esculentum]	362	636	2e-18
Rpg1 [Hordeum vulgare]	372	630	2e-19
Rpg1 [Hordeum vulgare]	382	630	4e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	306	328	in -> out

Report for 2715.m00180

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)