Report for 2730.m00145

 > 2730.m00145, length: 988, copies: 1 

MQDFDRNIESSKRQFPTRRSRLSPARPHRRSRLRLREPSRSCCWTMTRTWMKQVREVAFDAEDCIDTFWCYIGHH

YGARGVRCYCVPKVVYTLKTLKVRNNLAIKIQSLRTRVQRVSERRLRYMLNPTGSLSSSNYIDQERRLSALNIDE

SRLVGMADKTEEVTKLLDEGHVPNLKVVSVVGFGGLGKTTLAMTVYKSPAVKGIQSRAFVAVSQNYDPRALLESL

LKQLIQRPFLREPRSVDEETSTEDPLKGIETWDICQLINRCRNYLENKRYFIVLHDLWRPEAWMTLKIAFPDNDK

RSRILITTRNHLVAQICCYYPHDCIYSMEPLPSEESRHLFFKRVFKLDKCPSQYQDLVDISDAILRKCNGLPLAI

VSIGGMLARMKNKTYAEWQKVCDRLDCGLEINNTVGGMRKILSLGYNDLPYHLKACFLYLSVFPEDFEIKRGPLI

RRWAAEGFIGRVRGSNLEEIADKYFDEFISRNIVTPIRIDSSGEVRSCRVHDIMLEVISAISVQENFISLLGNYS

YSITGHDKIRRLSIHVGGGKEQDFSCRNLSHLRSLTILGCKEKPIPIALADLTLLRVLDLEGCGWLSDSDLKDIC

KLYLLRYVSLRSTNISKLPRAVGNLKELLTLDVRSTYIRELPATITQLRCLKHLLAGRYKYYTRTHHVKHFASKE

AVTIPAGLKNMSALQSIAPVNISSSFRAMHELGELSQLTKLCAINRKGVEKWRPFATSLSKLSNSLRHLSVIHID

KMEHGLEFLMDLSSPPLFLKKLYFWGRVSALPPWISSLSNLVRLSLRENYLESELVKILGKLHSLLSLKLYVNSY

LGTELCFEHNLFPRLKQLMIDNLKNLDELSFKGGAPDLERLTLAFVKAPERGISGIENLPKLKEVEFFGIIVDSV

VEGVIAAAKIHPNHPRVYRDETIDPRSLTTACRSQEYIQSPARQAVQGQRLSNNAKESTVVTSKEDGRSLAKAGR

KAGVTGCTGREGY

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	138	229	2.8e-16
NB-ARC [Pfam ls]	138	464	1.2e-53
NB-ARC [Pfam fs]	265	464	8.2e-38
LRR [Pfam ls]	604	626	7

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	579	603	2.7
LRR [sensitive, ls]	579	603	52
LRR [sensitive, ls]	604	626	0.36
LRR [sensitive, ls]	604	626	7
LRR [sensitive, ls]	627	649	1.5
LRR [sensitive, ls]	627	649	30
LRR [sensitive, ls]	790	813	0.52
LRR [sensitive, ls]	790	813	10

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	33	918	8e-90
Pib [Oryza sativa].	46	374	1e-18
RPM1 [A. thaliana]	48	895	1e-85
Pi-ta [Oryza sativa]	50	654	2e-78
Xa1 [Oryza sativa]	102	749	3e-24
I2 [L. esculentum]	121	820	1e-38
Pib [Oryza sativa].	149	891	9e-86
RPS2 [A. thaliana]	153	893	2e-25

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2730.m00145

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)