Report for 2730.m00147

 > 2730.m00147, length: 998, copies: 1 

MEAAVVSSTEGVVHILLGKLGEFLSDKYVLLSGVRHEIQELKDDLESMNACLRDLAAAGDYHQTQQTRTWMKQVR

EVAYDAEDCIDSFRYHVGGDRYRDEDLAGWLRRTVLRPLTTLRAMYKLAVEVQSLKARALMVSERRLRYKLEPPA

AASSSGEYAPRCYDDLDRRLPALSVDESRRRPQQDQSRPQAAGHGRRRRRLGPPEGGVHRRLRRPRQDDAGGDGV

QEPRGAGHPAQGIRDGDPELQPSSSAGIVGGAALRANARFTLLHEEDDHGSRRILRGIETKDIPQLLAHCSTHLR

DKRYFVVVDDVWSLEDWASLKPAFPDNDIHSRVVITTRNRQVAESCCSLPVDRVYSMDVLQDDQSRKLFFNTVFR

SNKCPAGYRRLETISGNILAKCGGLPLAIVSVGGMLAQAENKTPAEWMKVCDRLGSRLSTSAMMERMRRIMSLSY

HDLLYHLKACFLYLSVFREGYEIKRGPLVRRWAAEGFVGGRRECTPEEAAGKYLDEFVGRSIVTPTRVVSNGVVR

CCKVHDIMLEMMTEKCMEENFISLLGSPSKHGHQQHAMMVAAGHDKIRRLSVHGAHTSQGKQAGGVHDKHLCRRR

IKKDEEQDDVLSSGDLSCVRSLLMLRCIEKPIPVISFAKLKLIRVLDLEGCRWLSNHDLEDICKLSLLRYLSLRD

TGVQRLPRLIGRLKELLTLDIRETDVRALPETITRLGRLRHLLAGRYRYYTRSHRVKLFEPFEAVTIPPGLAAMG

SLQTIAHANIASSSIAMGELGDLPGLTKLCVMNCEEGPSKWEPFVISLNKLSYSLRSLSILHWQYDNAGLEALLD

LTSPPIFLEKFFLWGKLSTLPSWVSHLSNLVDLCLRENFLNGEVIIEQLGKLPSLLSLKLYRASYLGRELRFREK

LFPRLKQLIVDNLPNIEELSFQGGAPQLERLTLAVLKKPEDGIFGIDKLPMLKEVEFYGHIMIDSVVAEMVAVCR

NHPNKPRVYREDRPMEMDSESSN

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam ls]	240	493	5.7e-19
NB-ARC [Pfam fs]	299	493	4.9e-44
LRR [Pfam ls]	667	689	8.4

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	642	666	0.93
LRR [sensitive, ls]	642	666	18
LRR [sensitive, ls]	667	689	0.43
LRR [sensitive, ls]	667	689	8.4
LRR [sensitive, ls]	690	712	4.2
LRR [sensitive, ls]	690	712	82
LRR [sensitive, ls]	854	878	1.9
LRR [sensitive, ls]	854	878	38

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	11	989	5e-73
Pi-ta [Oryza sativa]	27	783	9e-59
Xa1 [Oryza sativa]	273	719	2e-17
Pib [Oryza sativa].	281	956	1e-67
I2 [L. esculentum]	287	885	9e-25
RPM1 [A. thaliana]	290	955	2e-55
RPS2 [A. thaliana]	299	488	4e-17

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	35	55

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2730.m00147

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)