Report for 2730.m00148

 > 2730.m00148, length: 1011, copies: 1 

MEAAVVSSTEGVVRILLAKLGEFLSDKYVLLSGVRHEIQELKDDLESMNACLRDLAAVGDYHQSQQTRTWMKQVR

EVAYDAEDCIDSFRYHVGGDRNHDEGLLVVAGWLRRTALRPLTTLRAMYKLAVEVQSLKARALKVSERRLRYRLE

PPAAASSSGEYAPRCYDDLDRRLPALSVDESRLVGVRSKTRAILKLLEHKDDGDDDGLARRKVVAVVGFGGLGKT

TLAAMVYKSPAVQGIHHRAFVTVTRSCNLRAMLESLLEQLFAPARDPRCSRKEIMAMEKDEILRGIETKDIPQLL

AHCSTHLSDKRYFIVVDDLWSLEDWASLKPAFPDNDKHSRIIITTRNRQVAESCCSLPGDRVHFMDVLPNDQSRE

LFFKTVFQKEHCPSEYRSLEGISGDILTKCGGLPLAIVSVGGMLAQAENKTPVEWTKVCGKLGSGLSTSAAVRGM

RRILSLSYHDLPYHLKACFLYLSVFREGYEIKRGPLVRRWAAEGFVGGGREWTPEEAAGKYIDEFVGRSIVTPTR

VATNGVVRCCKVHDIMLEVMTAKCVEENFISLLGSVTSYGRHQHTAATTTGHDKIRRLSVHGSHMPQGQQSRSGG

GDEDIFRFRRRRKKGEGEGQDDVLSSVDLSCARSLLMLRCIEKPLPSISFKRLKLLRVLDLEGCRWLSSRELDDI

CKLSLLRYLSLRDTGVQRLPRSVGRLKQLMTLDVRETDVRELPETITRLGHMRHLLSGRYRYYTRSHRVKLFEPF

EAMTIPPGLSAMESLQTIAHANVTSSGIAMGELGDLPSLTKLCVMNCEKGPNKWKPFIVSLNKLSYSLRSLSILH

WLNEDAGLEELLDLDSPPIFLEKFFLWGKLSMLPPWVSHLGNLVDLSLRENFLDGKEVIEQLGKLPSLLSLKLYY

QSYMGRELHFREKLFPRLKQLIVDNMPNLDELSFQGGAPELERLTLAVLKEPADGISGIDKLPRLKEVEFFGHVI

VDSVVESMVAVCKKHPNKPRVYRGDRPMEMDSELSS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	168	239	2.8e-08
NB-ARC [Pfam ls]	168	501	8e-49
NB-ARC [Pfam fs]	307	501	2.7e-42
LRR [Pfam ls]	655	679	9.6

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	655	679	0.49
LRR [sensitive, ls]	655	679	9.6
LRR [sensitive, ls]	680	702	0.63
LRR [sensitive, ls]	680	702	12
LRR [sensitive, ls]	703	725	5.5
LRR [sensitive, ls]	703	725	110
LRR [sensitive, ls]	867	891	1.1
LRR [sensitive, ls]	867	891	21

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pi-ta [Oryza sativa]	1	714	5e-67
RPM1 [A. thaliana]	11	968	1e-69
Mla1 [Hordeum vulgare].	11	1002	2e-91
Pib [Oryza sativa].	64	354	8e-18
RPS2 [A. thaliana]	134	496	8e-20
I2 [L. esculentum]	169	898	4e-30
Pib [Oryza sativa].	179	969	2e-80
Xa1 [Oryza sativa]	213	732	7e-20

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End
putative coiled-coil	35	55

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2730.m00148

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)