Report for 2734.m00060

 > 2734.m00060, length: 1546, copies: 1 

MARIRRASSGRDMSDNLVQHNRRSEAEISTHVDAAPPDAASNTSAAPSGLVQPPVSPHNACCSHNMVQKRGSQDC

HCVYPVRVELFLRNVSLTSNWSDEFLGELASQLSLRVTQFEIVNFYVVGASGLNITMYIAPHTGISFSADQVTAM

NYSLSQHTVQINPVLVGDYNLLNLTWFRPLVLAPVYFSVKVENTKRMFGDINMILPMNDINIISLYLQPSPTFTI

SPKPSPSQASTVPRHSADTSNEKHMSLITIICIFIGALIAVLVIAMFICFCKLRKGKRKVPPVETPKQRTPDAVS

AVDSLPRPTSTRFLAYDELKEATNNFDPSSMLGEGGFGRVFKGVLTDGTAVAIKKLTSGGHQGDKEFLVEVEMLS

RLHHRNLVKLIGYYSNRTLGASRPLDWDTRMRIALDAARGLAYLHEDSQPCVIHRDFKASNILLEDDFHAKVSDF

GLAKQAPEGCTNYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRRPVDMSQPSGQENLVTWARP

ILRDKDTLEELADPKLGGQYPKDDFVRVCTIAAACVSPEASQRPTMGEVVQSLKMVQRSEFQESIPTPPARPNVR

QSSTTYESDGTSSMFSSGPFSGLSPFETENISRTAFSEDLHEGRASESLTTHLKAGGASDLTSFIGRVRCSPAVA

LALVVAAAAAAAATAKLYSPADRILVNCGSTTDGLDAEGRRWVADATNDTWLTDSGKSSIMAAADELETMLPSSI

PYMTARVFTMDTVYNFTVNPRDRHWIRLHFYPSSYNGLEPQDFRFSVFTTTGYTLLHNFSVYFTTKALTQAYLIR

EYSLPRVPEGHFGVTFSPSPMMNVTYAFVNGIEVISMPDMFNNPATMVGFADQTADVSAAAFQTMYRLNVGGAYI

PPSNDSGLTRPWYDDTPFVQGPLRGLVYNAGPHFHIKYPSDAAEYAAPPEVYLGGRSMGRDQRLNQNSNLTWSLH

VECNFTYVVRLHFCELQLIHGNQRVFDIYINNRTAQTDVDVLEMATERGVPVYKDYAVRLSNDTADEHLWVAVHP

SVMLRPQFYDAILNGLEVFKVNNTGGSLASPDPVPYKLLAEKELGWGGPPEFSTDNPANMASVMGGTAGGAAAAG

IVAAICVVVYSNKRSKKLGGGGADSHTSAWLPLYHSHTSGKSSGHITANIAGMCRHFSFAEIKAATKNFSNDLAI

GVGGFGVVYRGVVDGDVKVAVKRSNPSSEQGITEFQTEVEMLSKLRHRHLVSLIGFCEEDGEMVLVYDYMEHGTL

REHLYHNGGKPTLSWRHRLDICIGAARGLHYLHTGAKYTIIHRDVKTTNILVDDNWVAKVSDFGLSKSGPTTLNQ

SHVSTVVKGSFGYLDPEYYRRQQLTDKSDVYSFGVVLFEVLMARPALDPALPRDQVSLADYALACKRGGALPDVV

DPAIRDQIAPECLAKFADTAEKCLSENGTERPTMGDVLWNLESAMHFQDAFDAAAGRPVPALDAAAGSSSHLDDG

STASINTLATSSTSHPHEPCVDVVLEPDDVVAERATFSQLVQPTGR

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	326	389	3e-12
Ser/Thr pkinase [Pfam ls]	326	580	1.5e-31
Ser/Thr pkinase [Pfam fs]	398	507	1.2e-24
Ser/Thr pkinase [Pfam fs]	1194	1391	4.8e-43
Ser/Thr pkinase [Pfam ls]	1194	1465	8.3e-42

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	231	578	7e-34
Rpg1 [Hordeum vulgare]	285	581	5e-19
Rpg1 [Hordeum vulgare]	311	592	3e-28
Pto [L. esculentum]	317	590	1e-52
FLS2 [A.thaliana]	1180	1466	1e-33
Rpg1 [Hordeum vulgare]	1180	1468	4e-33
Pto [L. esculentum]	1182	1475	4e-87
Rpg1 [Hordeum vulgare]	1182	1467	5e-24

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	251	273	in -> out

Report for 2734.m00060

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)