Report for 2737.m00100

 > 2737.m00100, length: 802, copies: 2 

MPVPCLPDQSAALLRLKRSFTITNDSQCTLASWRAGTDCCRWEGVRCGGANGDGRVRSLDLARCFLESAAIDPAL

FDLTSLRYLNLARNDFNGSELPATGFEPGAGPLCIHGYSDVYPRFLRKNRHLVCRIVELSSRTNLKSLAELSMML

IKTERVRRCMNIFFTPSYFEYPSLKSWARHWFERLKHLTHLNLSDASIQGKIPVGIRHLTNLVSLDLSTTFYLID

QDDYYLSFGTWSDPSWWVVEPNIGSLVANLSSLRELYLGRVDLSDNGEDWCTALTNSSTPQLQVLSLRHCRLFGP

ICTSLSSIHSLTEINLQYNDLYGPVPDSFADLHFLRVLDLADNDLEGLFPKRILQNRNLTTVHISYNTNIYGSLP

NFSPDSSLTTLIVSSTNFSGPIPSSIGNLKSLNELGVASNDFRQELPSSIGQLTSLKLLEATGAGIVGTIPSWIA

NLTSLVLLRFSNCGLSGPIPSSIVRKREVCVRVSVWADKWYQNLVREMPKIGDGSKAVAGDDDNSKLVVQQVKEA

GVTLRYPMLGENNYGIWAVKMKIFMHAQGVWAAVEGDAADEKIDQMALAAIVQAVPEAVVMAISEKETAKEAWDA

LKQMNMGEERVKKARVQTLKRELDGMYMSNSEKINDFALKVTTIVNEIRSLGTKVEETTVVEKLLHSVPDKFQPL

ISTIEQWGDVSEMTVTETIGRLRAFEESSKGQRRDKEGEQQLLAACAEPRLTRAEWEAKVAEESSGGSGSNGVGE

KKFRGKFDKSKIECHRCGKFGHFADECDEPRKMTKAVVQLAIADADDEPTLL

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	55	79	9
LRR [Pfam ls]	187	210	0.042
LRR [Pfam ls]	310	333	0.11
LRR [Pfam ls]	382	405	0.89

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	55	79	0.46
LRR [sensitive, ls]	55	79	9
LRR [sensitive, ls]	80	102	0.76
LRR [sensitive, ls]	80	102	15
LRR [sensitive, ls]	187	210	0.0021
LRR [sensitive, ls]	187	210	0.042
LRR [sensitive, ls]	257	280	1.2
LRR [sensitive, ls]	257	280	23
LRR [sensitive, ls]	286	309	0.59
LRR [sensitive, ls]	286	309	12
LRR [sensitive, ls]	310	333	0.0054
LRR [sensitive, ls]	310	333	0.11
LRR [sensitive, ls]	334	357	0.83
LRR [sensitive, ls]	334	357	16
LRR [sensitive, ls]	358	381	0.8
LRR [sensitive, ls]	358	381	16
LRR [sensitive, ls]	382	405	0.045
LRR [sensitive, ls]	382	405	0.89
LRR [sensitive, ls]	406	429	2.1
LRR [sensitive, ls]	406	429	42
LRR [sensitive, ls]	430	453	0.69
LRR [sensitive, ls]	430	453	14
LRR [sensitive, ls]	454	477	0.94
LRR [sensitive, ls]	454	477	19

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Cf-9 [L. pimpinellifolium]	1	478	9e-28
CLV2 [A. thaliana]	7	470	5e-27
Xa21 [O. sativa]	12	517	3e-14
FLS2 [A.thaliana]	22	473	5e-27
Cf-9 [L. pimpinellifolium]	56	470	1e-14
FLS2 [A.thaliana]	68	476	2e-18
Xa21 [O. sativa]	68	473	3e-16
FLS2 [A.thaliana]	184	490	5e-19
FLS2 [A.thaliana]	185	481	6e-15
FLS2 [A.thaliana]	185	477	1e-14
Xa21 [O. sativa]	185	498	2e-15
Xa21 [O. sativa]	188	470	3e-14
Xa21 [O. sativa]	243	455	8e-16
CLV2 [A. thaliana]	252	478	9e-13
Xa21 [O. sativa]	287	479	1e-14
Xa21 [O. sativa]	293	472	3e-19

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value
Zinc knuckle	762	779	0.00011

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2737.m00100

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)