Report for 2763.m00144

 > 2763.m00144, length: 904, copies: 1 

MGRRGGGGRAGGAWIGGCVLALAATLVVCVLVIRGAGGLKQYHAPAFARKILLSITSGHPQDNLNIVLHPSQLQT

PRLQSLGLNVKPPAATSRRVNVQQELYAPSPTISHRGLAIPPLPTTSPPVFPPPIRSYPPLPANKPYPNSPVVAP

PKGRHHHSLPVNNTRVKGPAYSPSNSPSIHRKHGIPVAAPPKQHSSNLPPSHHRPHKGSFPVISPTPHKADNASA

TKHGRSGLHHSPAPAPVGLPPSEGNARGNPAYAPRHPHEYHSPSNSPDCMALNCQDPLTNSLPGTTCLCVWPIKV

ELRLGIALYTFFALVSELAQDIASGVLMKQSQVRVMGANAATEDPEKTVVLIDLVPLGEKFDKATALLVFERFWH

KQVNINSMHFGNYDVLYVTYQGLPPSPPTAPRMNNGLSNVNDPRLHPLAVDVGNHRETKSRGIIVIIVLSSVFAF

ILCSGAALVICFKIRNRNHLTEESPMPPKPAGPGSAVVGSRLGSRPISASPSFSSSIVTYKGTAKTFSLIEMERA

TQRFDNSRIIGEGGFGRVYEGILEDGERVAVKILKRDDQQVTREFLAELEMLSRLHHRNLVKLIGICTEEHIRCL

VYELVPNGSVESHLHGSDKGTAPLDWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG

LARTAIGEGNEHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDILRPPGQENLVAWACPF

LTSRDGLETIIDPSLGNSILFDSIAKVAAIASMCVQPEVDQRPFMGEVVQALKLVCDEGSEFNESGSFSQDLHIQ

DSGIISRASLDVDVEPVVSAELFNASAHYDTLDASGSFRRYSSSGPLRVGRTGHNRERGLSTGSSSEHCGTQRFR

IDSE

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
Ser/Thr pkinase [Pfam fs]	529	738	3.5e-55
Ser/Thr pkinase [Pfam ls]	529	804	4.8e-52

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Pto [L. esculentum]	492	803	6e-60
Xa21 [O. sativa]	507	615	1e-13
FLS2 [A.thaliana]	515	814	2e-36
Rpg1 [Hordeum vulgare]	515	802	1e-31
Rpg1 [Hordeum vulgare]	517	802	4e-23

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	10	32	out -> in
putative TM domain	438	460	in -> out

Report for 2763.m00144

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)