Report for 2763.m00154

 > 2763.m00154, length: 656, copies: 2 

MALRVLFLMLSAFPASCLAVAAPISPDAVPLLAFKSACADPAAALVSWTEASDPCSDRWRGITCRKPSPSPPPSS

PPRVRRVVLEGLRLGGDAGAVAALAGLPMLSFLSLKNNSFTGSLGDVDFSTLAPHLKLLYLSGNGFSGRFPESVL

RLRHLRRLDLSGNRLTCTIPPEIGHRLPSLLTLHLARNSLVGPLPASLGAMARLAKLNVSGNHLQGRIPKRLAAV

FPASSFTGNPELCGAPLRRRCNEQLHMVYGGGGSGADTSHQPKRGRRRSNDRWMVAMIMAAVGAAVASLVAAALC

GVLWLKNKKPERPRASSRTSSMAREETVRFDGCCVEFDVCTLMRGAAEMLGKGATATTYRVAMGGDNVIVDDASV

VEEGKAGEVVVVKRMRRREGATREDERRKRKLAREMGTWRHANVVSLRAFYASADELLLVFDYVPNGSLHSLLHE

NRGPARVPLEWQTRLKLAQDAAQGLAYLHGVSGGKLAHRHLTSSNILVDAGGNARVSDFALLQLLVPAPAADEAA

QKQDVHAFGVVLLEILTGRSPEDGNVDLALWARTVVREEWTSEVFDVELLPSRGGAEDEMVALLHVALLCVADDP

GERPRMAVVAKMIEDIRDRGSKRSRYSASPSQVGHSYESSPSISEDTTRSTNASSS

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
LRR [Pfam ls]	130	153	0.43
LRR [Pfam fs]	154	178	1.8e-05
LRR [Pfam ls]	154	178	0.00027
LRR [Pfam ls]	203	227	0.72
Ser/Thr pkinase [Pfam ls]	348	613	1.5e-12
Ser/Thr pkinase [Pfam fs]	415	511	3.3e-17
Ser/Thr pkinase [Pfam fs]	527	546	0.33

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value
LRR [sensitive, ls]	104	128	1.1
LRR [sensitive, ls]	104	128	22
LRR [sensitive, ls]	130	153	0.022
LRR [sensitive, ls]	130	153	0.43
LRR [sensitive, ls]	154	178	1.4e-05
LRR [sensitive, ls]	154	178	0.00027
LRR [sensitive, ls]	179	202	0.88
LRR [sensitive, ls]	179	202	17
LRR [sensitive, ls]	203	227	0.037
LRR [sensitive, ls]	203	227	0.72

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
FLS2 [A.thaliana]	6	219	4e-14
Xa21 [O. sativa]	27	219	2e-12
Xa21 [O. sativa]	79	230	1e-10
FLS2 [A.thaliana]	83	224	1e-11
Xa21 [O. sativa]	97	449	3e-11
FLS2 [A.thaliana]	104	621	2e-31
Pto [L. esculentum]	371	614	7e-15

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation
putative TM domain	283	305	out -> in

Report for 2763.m00154

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)