Report for 2780.m00170

 > 2780.m00170, length: 1030, copies: 1 

MAEVVTSIVVKPLLSMVKDKVSSYLLQEYRVMEGLEEQHKILKRKLPAILDVISDAEKQASEQREGAKAWLEELK

TVAYEANDIFDEFKYEALWREAKKNGHYTALGFDVVKLFPTHNRVMFRYRMDKRLCKIVHDIEVLVTEMNAFRFR

FQPQPLVSMQWRQTDSEIFDPTNIISKSRSQEKLKIVNILLGQASSPDLLVLPIVGIGGLGKTTLAQLVYNDSEI

QKHFQLLVWVCVSDPFDVDSIAENIVKLADRSKEVKEDGKHQIDYHVSQVTKDKPLQKLQKLVSGQRYLLVLDDV

WSRDADKWEKLKASLQHGSIGSAVLTTTRDEQVAQLMQTTDAYNLTALENSIIKEIIDTRAFSLRKDEKPNEQVE

MIDKFVNRCVGSPLAATALGSLLRTKETVQEWQAILMRSSICNEETGILHILKLSYDDLPSYMKQCFAFCAMFPK

DYVIDVDNLIHHLAKYSSVRALKLSKEMRLIQLKPKILHHLSNVGELQKLDIGGHLELHQLQNVRESDAIHTKLD

SKRKIMELSLVWDNEEPRNETADSSHNKVMEALRPHDNLLVLKVASYKGTTLPSWVSMLEGLIELDLSTSYTRCE

NIPQLWQLQYLQLLRLAGFDRLQYLCSIGENSTTCSIFPKLKELTLENLKSFKGWWDKTERQEQPSCDNDNNKTP

TALPNFPQELQLIELNKIDRWQQVEATHVKTPMFPNLENIRIMDCPKLASLPEARKLSVLHITKGSQQLLFCIPR

YITSLSTLSLLQEGVETAPPAEHNLIEWVDDNENWKGESPLADMRLDNFNMFFLSGAHALWTCFAQLIVLRICRC

DVLIHWPEKEFQGLVSLKTLGIVSCNKLKGYAQAPERSTSGGGQLLTRLESLTIIECKSLVEVFNTPPSLKYLHI

RRCPELKSIFGKQRRGSTLIEGPCSDNIVSAPVLEPSSPAGDHFSPPESLESPHSGELPSLVKLTLCYCKSLASS

SLPNSPQAYSSLQGLIIMECPALKVLPTCLRQRLGSLEWKELDARHEELFLQSDK

HMM searches against classifier domains (fs and ls)

Domain	Begin	End	E-value
NB-ARC [Pfam fs]	159	461	2.7e-55
NB-ARC [Pfam ls]	159	474	1.4e-54

Searches for specific additional domains (secondary HMMs)

Domain	Begin	End	E-value

BLAST searches against classifier sequences

Query sequence	Begin	End	E-value
Mla1 [Hordeum vulgare].	9	481	3e-22
RPM1 [A. thaliana]	20	720	4e-33
I2 [L. esculentum]	25	461	1e-48
Pi-ta [Oryza sativa]	27	460	7e-16
Pib [Oryza sativa].	179	464	2e-22
Xa1 [Oryza sativa]	183	556	1e-37
N [N. glutinosa]	201	900	4e-17
RPS2 [A. thaliana]	201	909	2e-22
I2 [L. esculentum]	455	1002	2e-14

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)

Domain	Begin	End	E-value

NCOILSv2.0 search for coiled-coil domains

Domain	Begin	End

TM-HMM search for transmembrane domains

Domain	Begin	End	Orientation

Report for 2780.m00170

HMM searches against classifier domains (fs and ls)

Searches for specific additional domains (secondary HMMs)

BLAST searches against classifier sequences

HMM search against whole Pfam_ls HMM database(excluding classifier domains, except LRR)

NCOILSv2.0 search for coiled-coil domains

TM-HMM search for transmembrane domains

HMM search against whole Pfam_ls HMM database
(excluding classifier domains, except LRR)